Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120914.seq
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA...    29   4.1  
S68803-1|AAB29876.2|  540|Drosophila melanogaster prn protein.         29   7.2  
S68798-1|AAB29874.1|  540|Drosophila melanogaster dGATAa protein.      29   7.2  
AY095095-1|AAM11423.1|  486|Drosophila melanogaster SD02611p pro...    29   7.2  
AE014297-2136|AAF55264.3|  488|Drosophila melanogaster CG3978-PB...    29   7.2  
AE014297-2135|AAN13693.1|  540|Drosophila melanogaster CG3978-PA...    29   7.2  
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    28   9.6  

>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
           protein.
          Length = 1860

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -3

Query: 304 GCKYSGSPCFATLSGACAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRC 152
           G  YS S C A ++    G   +A  S  T R R  +LP+ +L  +    C
Sbjct: 801 GKSYSSSECLADVTMPSYGGNSYASRSKSTSRSRKSMLPIRDLSEMRTDEC 851


>S68803-1|AAB29876.2|  540|Drosophila melanogaster prn protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 175 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 204


>S68798-1|AAB29874.1|  540|Drosophila melanogaster dGATAa protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 175 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 204


>AY095095-1|AAM11423.1|  486|Drosophila melanogaster SD02611p
           protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 123 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 152


>AE014297-2136|AAF55264.3|  488|Drosophila melanogaster CG3978-PB,
           isoform B protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 123 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 152


>AE014297-2135|AAN13693.1|  540|Drosophila melanogaster CG3978-PA,
           isoform A protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 175 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 204


>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
           isoform B protein.
          Length = 1249

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 740 ISTPLWRRDNTGHYLC--NACGLYMKMNGMNR 769


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,565,216
Number of Sequences: 53049
Number of extensions: 652201
Number of successful extensions: 1490
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)