Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120912.seq
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   0.53 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.71 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 199 PXLKVLVALGG-TAXRPVLGGSGSESKM 119
           P LKVL+++GG  A   +L G  + SK+
Sbjct: 94  PDLKVLISIGGWNAGNAILNGIVASSKL 121


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = +3

Query: 93  RPPGGGHTNIFDSEPE--PPRTGRXAVPPSAT------STFSXGQGDEPKATNGTSVATN 248
           R PGG H+     EPE    ++    VP S +      + FS GQ + P ++  TS  + 
Sbjct: 16  RSPGGDHSENMQDEPENLSNKSNSITVPLSISTGQRLPANFSFGQVNSPPSS--TSSGSL 73

Query: 249 GQ 254
           GQ
Sbjct: 74  GQ 75


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 181  VALGGTAXRPVLGGSGSESKMLVWPPPGG 95
            V L GTA  P  G SG  S     PP  G
Sbjct: 1104 VPLKGTAVPPPSGSSGPGSTGSKSPPVAG 1132


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 199 PXLKVLVALGGTA 161
           P LK+L+A+GG A
Sbjct: 588 PDLKILLAIGGWA 600


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 199 PXLKVLVALGGTA 161
           P LKVL+++GG A
Sbjct: 97  PKLKVLLSVGGNA 109


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -2

Query: 173  WWNGTAPGPRW 141
            WW+ T   P W
Sbjct: 1042 WWSSTTTSPWW 1052


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,069
Number of Sequences: 336
Number of extensions: 2235
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)