Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120910.seq
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.40 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 351 VKWDSFKCNTHSFK-YRYVHNDTNAKFYNVIDFCKGLEI 464
           V WD  + NTH +K  ++V  D+     N +++ K L +
Sbjct: 313 VVWDDTQKNTHMYKGDQWVAFDSPKAISNKVEYAKSLNL 351


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 9   GERPYVCTFRICKIQTWTRS 68
           GERP+VC +  C  + +TRS
Sbjct: 341 GERPFVCNWLFCG-KRFTRS 359


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 424 FAFVSLCTYLYLKLCVLHLNESHLTMC 344
           +AF+    +L L +C+ +    HL  C
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFC 269


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 57  WTRSRCSIGRTWTGIFFVTLTNKYAHRTAI 146
           WTR+   I +   G F+ +LTN +    A+
Sbjct: 286 WTRNADDISQEEYGEFYKSLTNDWEDHLAV 315


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 509 NLISVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 375
           N+I + + + YVV        K    VEF +++V   S L+T+ +
Sbjct: 353 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 397


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 509 NLISVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 375
           N+I + + + YVV        K    VEF +++V   S L+T+ +
Sbjct: 78  NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 122


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 531 KIISFKW*LDLCPNCNQVCRRAQFQDLCKNLLHCRILRS 415
           K++  KW  D      +V  R + Q LC  LL   ILR+
Sbjct: 702 KLMGGKWSCDCDLGWVEVWERKRRQYLCPVLLRVSILRN 740


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 590 WSRTMRPNEVEDRVW 546
           WS  + P+ +E R+W
Sbjct: 513 WSEQVGPDSLETRIW 527


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 435 VIDFCKGLEIAHDDILDCN 491
           V DFC+ L+ AH + +  N
Sbjct: 308 VKDFCQNLDKAHQESIIMN 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,584
Number of Sequences: 336
Number of extensions: 2993
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)