Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120908.seq
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    30   3.1  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    30   3.1  
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   5.5  
AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p pro...    28   9.6  

>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +1

Query: 64  SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 243
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 452 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 511

Query: 244 FLEKRTLTIS 273
            + K   T S
Sbjct: 512 NMGKSPRTRS 521


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +1

Query: 64  SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 243
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 723 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 782

Query: 244 FLEKRTLTIS 273
            + K   T S
Sbjct: 783 NMGKSPRTRS 792


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 118  NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 216
            N  +Q ++T TAA C N K  N L   S+  +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053


>AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p
           protein.
          Length = 880

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 300 ERKMSKRKKKVINNNKYILFNSWYTK 377
           E +  K KKK+  N+ Y L N W+T+
Sbjct: 42  EHRKPKTKKKISTNSYYELANLWHTR 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,347,735
Number of Sequences: 53049
Number of extensions: 653743
Number of successful extensions: 1720
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)