Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120908.seq
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g70220.1 68414.m08080 hypothetical protein 30 1.2
At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ... 30 1.5
At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote... 30 1.5
At5g17690.1 68418.m02073 like heterochromatin protein (LHP1) ide... 29 2.7
At1g23480.2 68414.m02946 glycosyl transferase family 2 protein s... 29 3.5
At1g23480.1 68414.m02945 glycosyl transferase family 2 protein s... 29 3.5
At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2) 28 4.7
At4g36010.1 68417.m05127 pathogenesis-related thaumatin family p... 28 4.7
At2g17860.1 68415.m02069 pathogenesis-related thaumatin family p... 28 4.7
At2g04080.1 68415.m00391 MATE efflux family protein similar to h... 28 6.2
At2g24810.1 68415.m02968 pathogenesis-related thaumatin family p... 27 8.2
>At1g70220.1 68414.m08080 hypothetical protein
Length = 170
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +1
Query: 502 DRLVVLQATTQPIPASKKRQTAVLTN-----ANLGRIKRELRNARLSFISGVLQ 648
D LV+LQ T+P P K V N NLGR+K L L + G+++
Sbjct: 87 DGLVILQEGTKPKPLDSKSLRMVNVNYITEMKNLGRVKERLAKNTLVNLDGLIE 140
>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
GP:3172044:gnl:PID:d1029570:AB010080
Length = 1332
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -3
Query: 509 SRSVGHFFTHLFSVIKNEHKICQF-GRVFHQIPHGRATRPLGLLDLSVPTVKQNVFIVVN 333
S +VG+ F + +I++ H+IC H H + L L S ++ N F +
Sbjct: 507 SLAVGYLFEFFYPLIESGHRICSLDSGNKHNNSHVDTVKSLPFLSSSQQVLESNEFKPIG 566
Query: 332 HLLLAFGHFAFVLHDRHYVEDI 267
++ G + +V+DI
Sbjct: 567 EAVIKVGAALQASGEAVFVDDI 588
>At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 324
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 397 LVARPCGIW*KTRPNWQILCSFLITLKRWVKKW---PTDRLVVLQ-ATTQPIPASKKRQT 564
LVA C I K RP W + FLI + R++ W PT+ L+ + P +K+
Sbjct: 161 LVAPMCKISDKVRPKWPV-DQFLIMISRFLPTWAIVPTEDLLEKSIKVEEKKPIAKRNPM 219
Query: 565 AVLTNANLGRIKRELR 612
LG + LR
Sbjct: 220 RYNEKPRLGTVMELLR 235
>At5g17690.1 68418.m02073 like heterochromatin protein (LHP1)
identical to like heterochromatin protein LHP1
[Arabidopsis thaliana] GI:15625407; contains Pfam
profile PF00385: 'chromo' (CHRromatin Organization
MOdifier)
Length = 445
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 378 IKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGK 488
IK WP + W+ ++N +AD + F+ + K GK
Sbjct: 127 IKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGK 163
>At1g23480.2 68414.m02946 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535 isoform contains GG
acceptor splice site at intron 1
Length = 484
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 493 WPTDRLVVLQATTQPIPASKKRQTAVLTN-ANLG-RIKRELRNARLSFISGVLQ 648
WP DR++V PASK+ A A G I E+R+ R+ + +G L+
Sbjct: 75 WPLDRMIVQVLDDSTDPASKELVNAECDKWARKGINIMSEIRDNRIGYKAGALK 128
>At1g23480.1 68414.m02945 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535 isoform contains GG
acceptor splice site at intron 1
Length = 556
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 493 WPTDRLVVLQATTQPIPASKKRQTAVLTN-ANLG-RIKRELRNARLSFISGVLQ 648
WP DR++V PASK+ A A G I E+R+ R+ + +G L+
Sbjct: 147 WPLDRMIVQVLDDSTDPASKELVNAECDKWARKGINIMSEIRDNRIGYKAGALK 200
>At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)
Length = 638
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 542 QRAKKDRLRCLPTQIWAELKESCEM 616
Q+A RCL + A+LK+SCE+
Sbjct: 429 QKAMSRHFRCLKDAVAAQLKQSCEL 453
>At4g36010.1 68417.m05127 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 301
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 140 EDCCSGMFTMFDFCKPLKRPACILDDIFF*CPTAWQFVCDEDT 12
E CCSG F D CKP + + CP A+ + D+ T
Sbjct: 196 EYCCSGAFGTPDTCKPSEYSQFFKNA----CPRAYSYAYDDGT 234
>At2g17860.1 68415.m02069 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 253
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 140 EDCCSGMFTMFDFCKPLKRPACILDDIFF--*CPTAWQFVCDEDT 12
E CC+G F D C+P + +FF CPTA+ + D+ T
Sbjct: 195 EFCCNGAFGTPDTCQPSEY------SVFFKKTCPTAYSYAYDDGT 233
>At2g04080.1 68415.m00391 MATE efflux family protein similar to
hypothetical protein GB:AAC27412; contains Pfam profile
PF01554: Uncharacterized membrane protein family
Length = 476
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 337 TTINTFCLTVGTLRSSSPSGLVA 405
T++ + CLT+GTL PSG+ A
Sbjct: 287 TSVLSICLTIGTLHYVIPSGVAA 309
>At2g24810.1 68415.m02968 pathogenesis-related thaumatin family
protein similar to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile PF00314:
Thaumatin family
Length = 193
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 140 EDCCSGMFTMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 21
E CC+G F+ + C P K CPTA+ +V D
Sbjct: 139 EYCCTGAFSKPETCPPTKYSKIFKGA----CPTAYSYVYD 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,768,780
Number of Sequences: 28952
Number of extensions: 312746
Number of successful extensions: 848
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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