Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120906.seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 513 IYQIKLIVVLCFYAFYMA 460
           ++   LI++LC Y FY A
Sbjct: 227 LFYCVLIILLCIYYFYYA 244



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 513 IYQIKLIVVLCFYAFYMAV 457
           I+ + L+ +LC Y FY A+
Sbjct: 274 IFTMHLLFLLCIYYFYCAL 292



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 519 VQIYQIKLIVVLCFYAFYMA 460
           +  + + L  +LC Y FY A
Sbjct: 133 IYYFVVPLFFLLCIYYFYCA 152



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -1

Query: 513 IYQIKLIVVLCFYAFY 466
           ++ + L++++C Y FY
Sbjct: 247 LFTVHLLLLVCIYYFY 262


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 160 FETIFDKCQLCFSHNFIAQAIFNILCRNIR 71
           F+T  + C +   + F+  ++ NIL R+ +
Sbjct: 168 FKTFLNSCLMDVYYEFLLISLINILIRSFK 197


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 93  LKIACAIKLWLKQSWHLSKIV 155
           L +  A+K W K+ +  SKIV
Sbjct: 394 LSVDYAVKFWTKKGFPKSKIV 414


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 550 TPYALVISICSA 515
           TPY L+I +C+A
Sbjct: 285 TPYYLLIEVCNA 296


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 341 CWSTHFCKLVCR 306
           CW  H CKL  +
Sbjct: 492 CWVPHSCKLTSK 503


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 84  QRILKIACAIKLWLKQSWHLSKI 152
           Q+ L +A  I+ WL +    SKI
Sbjct: 235 QKTLNVAAGIQYWLDEGAPPSKI 257


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 84  QRILKIACAIKLWLKQSWHLSKI 152
           Q+ L +A  I+ WL +    SKI
Sbjct: 236 QKTLNVAAGIQYWLDEGAPPSKI 258


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 84  QRILKIACAIKLWLKQSWHLSKI 152
           Q+ L +A  I+ WL +    SKI
Sbjct: 236 QKTLNVAAGIQYWLDEGAPPSKI 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,059
Number of Sequences: 336
Number of extensions: 3103
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)