Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120906.seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    25   2.7  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    24   3.6  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    24   3.6  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   4.8  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   6.3  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   6.3  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   6.3  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.3  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   8.3  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 451 HLNRHIKCIKTQYNDEFDLVDLHY 522
           +L + ++ IKT +ND FD +  H+
Sbjct: 220 NLAKLVETIKTNFNDRFDDIRRHW 243


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 346 AELDVLTRQIYMSNPLVMLKCY 411
           AEL  L + I+ +NP   LKCY
Sbjct: 52  AELHGLRKSIFPANPDKELKCY 73


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 346 AELDVLTRQIYMSNPLVMLKCY 411
           AEL  L + I+ +NP   LKCY
Sbjct: 52  AELHGLRKSIFPANPDKELKCY 73


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 224 IDDDDYKSALNA*ILIITAFAQKKCFATCKLIYKNASTNITL 349
           ID  DY  ++   I+ + A   +K ++ C+  Y +   NITL
Sbjct: 194 IDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITL 235


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +3

Query: 75  ILRQRILKIACAIKLWLKQSWHLSKIVS 158
           + R++ + +  AIK W+++  H+ ++VS
Sbjct: 318 LTRKQEMMVRSAIKYWVERHKHVVRLVS 345


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +3

Query: 75  ILRQRILKIACAIKLWLKQSWHLSKIVS 158
           + R++ + +  AIK W+++  H+ ++VS
Sbjct: 171 LTRKQEMMVRSAIKYWVERHKHVVRLVS 198


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +3

Query: 75  ILRQRILKIACAIKLWLKQSWHLSKIVS 158
           + R++ + +  AIK W+++  H+ ++VS
Sbjct: 318 LTRKQEMMVRSAIKYWVERHKHVVRLVS 345


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 95  EDRLRDKIVAKAKLAFIKDCFEAVVCENG 181
           +DR  + I     LA  K C E   C NG
Sbjct: 73  DDRTCENIRRGDHLACTKHCVEGCFCRNG 101


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 254 NA*ILIITAFAQKKCFATC 310
           NA +L ITAF  ++ FA C
Sbjct: 131 NATVLTITAFTIERYFAIC 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,570
Number of Sequences: 2352
Number of extensions: 12252
Number of successful extensions: 44
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)