Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120905.seq
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC...   109   3e-24
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB...   109   3e-24
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA...   109   3e-24
AY118861-1|AAM50721.1|  140|Drosophila melanogaster GM23845p pro...    28   9.4  
AF145688-1|AAD38663.1| 1420|Drosophila melanogaster BcDNA.LD2605...    28   9.4  
AE014297-723|AAF54210.2|  140|Drosophila melanogaster CG11671-PA...    28   9.4  
AE013599-1169|AAF58755.1| 1420|Drosophila melanogaster CG12340-P...    28   9.4  

>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
            isoform C protein.
          Length = 2682

 Score =  109 bits (262), Expect = 3e-24
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = +2

Query: 8    LVMYTFNDKLFPETLNFISGSGIIGLYTTFVFLASRILRGFFSGIYTKIMFDDLPNVDRV 187
            +VMYTFNDK FP T +F++  GIIGLYTTFV LASR ++ F  G   KIMF+DLP VDRV
Sbjct: 2549 IVMYTFNDKKFPSTFSFLTAGGIIGLYTTFVLLASRFMKSFIGGQNRKIMFEDLPYVDRV 2608

Query: 188  LQLCLDIYLVR 220
            LQLCLDIYLVR
Sbjct: 2609 LQLCLDIYLVR 2619



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/22 (86%), Positives = 22/22 (100%)
 Frame = +1

Query: 256  AKLVFLYRSPETMIKWSRPKEE 321
            AKL+FLYRSPET+IKW+RPKEE
Sbjct: 2632 AKLLFLYRSPETLIKWTRPKEE 2653


>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
            isoform B protein.
          Length = 2720

 Score =  109 bits (262), Expect = 3e-24
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = +2

Query: 8    LVMYTFNDKLFPETLNFISGSGIIGLYTTFVFLASRILRGFFSGIYTKIMFDDLPNVDRV 187
            +VMYTFNDK FP T +F++  GIIGLYTTFV LASR ++ F  G   KIMF+DLP VDRV
Sbjct: 2587 IVMYTFNDKKFPSTFSFLTAGGIIGLYTTFVLLASRFMKSFIGGQNRKIMFEDLPYVDRV 2646

Query: 188  LQLCLDIYLVR 220
            LQLCLDIYLVR
Sbjct: 2647 LQLCLDIYLVR 2657



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/22 (86%), Positives = 22/22 (100%)
 Frame = +1

Query: 256  AKLVFLYRSPETMIKWSRPKEE 321
            AKL+FLYRSPET+IKW+RPKEE
Sbjct: 2670 AKLLFLYRSPETLIKWTRPKEE 2691


>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
            isoform A protein.
          Length = 2771

 Score =  109 bits (262), Expect = 3e-24
 Identities = 50/71 (70%), Positives = 57/71 (80%)
 Frame = +2

Query: 8    LVMYTFNDKLFPETLNFISGSGIIGLYTTFVFLASRILRGFFSGIYTKIMFDDLPNVDRV 187
            +VMYTFNDK FP T +F++  GIIGLYTTFV LASR ++ F  G   KIMF+DLP VDRV
Sbjct: 2638 IVMYTFNDKKFPSTFSFLTAGGIIGLYTTFVLLASRFMKSFIGGQNRKIMFEDLPYVDRV 2697

Query: 188  LQLCLDIYLVR 220
            LQLCLDIYLVR
Sbjct: 2698 LQLCLDIYLVR 2708



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/22 (86%), Positives = 22/22 (100%)
 Frame = +1

Query: 256  AKLVFLYRSPETMIKWSRPKEE 321
            AKL+FLYRSPET+IKW+RPKEE
Sbjct: 2721 AKLLFLYRSPETLIKWTRPKEE 2742


>AY118861-1|AAM50721.1|  140|Drosophila melanogaster GM23845p
           protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 37  LPRNVKLHIRKRYNRAVHDVRVPRVSDTARLLLRHLHQDHV 159
           L  + +  + +   RA+ +VR  RV D ARL+L + H   V
Sbjct: 81  LTESQRRELEQHVIRAISEVRNVRVRDVARLILNNRHVQEV 121


>AF145688-1|AAD38663.1| 1420|Drosophila melanogaster BcDNA.LD26050
           protein.
          Length = 1420

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 160 EHDLGVDAGEEAAQYPRREEHERRVQPDY 74
           E  + VD  EE+ +    EEH+ + +PDY
Sbjct: 381 EESIQVDEPEESKESEELEEHKEKEEPDY 409


>AE014297-723|AAF54210.2|  140|Drosophila melanogaster CG11671-PA
           protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 37  LPRNVKLHIRKRYNRAVHDVRVPRVSDTARLLLRHLHQDHV 159
           L  + +  + +   RA+ +VR  RV D ARL+L + H   V
Sbjct: 81  LTESQRRELEQHVIRAISEVRNVRVRDVARLILNNRHVQEV 121


>AE013599-1169|AAF58755.1| 1420|Drosophila melanogaster CG12340-PA
           protein.
          Length = 1420

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 160 EHDLGVDAGEEAAQYPRREEHERRVQPDY 74
           E  + VD  EE+ +    EEH+ + +PDY
Sbjct: 381 EESIQVDEPEESKESEELEEHKEKEEPDY 409


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,757,653
Number of Sequences: 53049
Number of extensions: 411373
Number of successful extensions: 1110
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)