Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120904.seq
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   4.7  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   8.3  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 608 CDLRATCIIKFINTSVF 558
           C+ +A CI  F NT V+
Sbjct: 156 CNFKAYCIFSFFNTIVY 172


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +2

Query: 167 HVANHQHHGLSNGRVVVNQRHYAQ*N*KFKILSTQSVGARNLLEPMQANETKIKLNRIET 346
           H AN+    +S  R    +  Y   N K  +L     G R+ ++ +      +KLN I+T
Sbjct: 127 HAANNNISRVSCSRGQGKKNIYLANN-KITVLRDLDEGCRSRVQYLD-----LKLNEIDT 180

Query: 347 VNVLDFLGS 373
           VN+ +   S
Sbjct: 181 VNLAELAAS 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,553
Number of Sequences: 2352
Number of extensions: 14134
Number of successful extensions: 63
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)