Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120904.seq
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing ...    32   2.0  
AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens ...    32   2.0  
DQ333316-1|ABD24032.1| 2881|Homo sapiens PRIC320 isoform 1 protein.    31   4.6  
AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.                31   4.6  
AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling fa...    31   4.6  
AK092208-1|BAC03829.1|  638|Homo sapiens protein ( Homo sapiens ...    31   4.6  
AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein.             31   4.6  
BC109395-1|AAI09396.1|   99|Homo sapiens defensin, beta 127 prot...    30   6.1  
BC069486-1|AAH69486.1|   99|Homo sapiens defensin, beta 127 prot...    30   6.1  
AY358796-1|AAQ89156.1|   99|Homo sapiens DEFB127 protein.              30   6.1  
AL360078-3|CAC17685.1|   99|Homo sapiens defensin, beta 127 prot...    30   6.1  
AF525929-1|AAP47222.1|   99|Homo sapiens beta-defensin 27 precur...    30   6.1  
X67884-1|CAA48083.1|  126|Homo sapiens immunoglobulin VH6 protein.     30   8.1  
DQ232881-1|ABB18374.1|  868|Homo sapiens LIN41 protein.                30   8.1  

>BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing 1
           protein.
          Length = 290

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 438 AIALYLEINKLRLKIDEPMQLGDMPQIFPLLCDEHQNVAVEHRR 569
           A+ L LEI + RL +  P QL  +    PL  + H++ A  HR+
Sbjct: 232 ALGLSLEIGENRLVMGGPQQLYHLDAYIPLQINSHESKAAFHRK 275


>AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20643 fis, clone KAT02633. ).
          Length = 290

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 438 AIALYLEINKLRLKIDEPMQLGDMPQIFPLLCDEHQNVAVEHRR 569
           A+ L LEI + RL +  P QL  +    PL  + H++ A  HR+
Sbjct: 232 ALGLSLEIGENRLVMGGPQQLYHLDAYIPLQINSHESKAAFHRK 275


>DQ333316-1|ABD24032.1| 2881|Homo sapiens PRIC320 isoform 1 protein.
          Length = 2881

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 541 CSSQSKGNIWGISPNCIGSSIFNRNLFISKYN 446
           CSS  +GN  G SPN    S+ N   F S Y+
Sbjct: 244 CSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYS 275


>AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.
          Length = 2881

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 541 CSSQSKGNIWGISPNCIGSSIFNRNLFISKYN 446
           CSS  +GN  G SPN    S+ N   F S Y+
Sbjct: 244 CSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYS 275


>AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling
           factor CHROM1 protein.
          Length = 2897

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 541 CSSQSKGNIWGISPNCIGSSIFNRNLFISKYN 446
           CSS  +GN  G SPN    S+ N   F S Y+
Sbjct: 244 CSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYS 275


>AK092208-1|BAC03829.1|  638|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34889 fis, clone NT2NE2017397, weakly similar to
           Rattus norvegicus beta-catenin binding protein mRNA. ).
          Length = 638

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 541 CSSQSKGNIWGISPNCIGSSIFNRNLFISKYN 446
           CSS  +GN  G SPN    S+ N   F S Y+
Sbjct: 244 CSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYS 275


>AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein.
          Length = 2759

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 541 CSSQSKGNIWGISPNCIGSSIFNRNLFISKYN 446
           CSS  +GN  G SPN    S+ N   F S Y+
Sbjct: 121 CSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYS 152


>BC109395-1|AAI09396.1|   99|Homo sapiens defensin, beta 127
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 INDITPNKTESLKFCLLNLSERAICWNRCKPTRPK 323
           +N++     E+ ++C LN+ E   C    KP RPK
Sbjct: 39  VNEVPEALCENGRYCCLNIKELEACKKITKPPRPK 73


>BC069486-1|AAH69486.1|   99|Homo sapiens defensin, beta 127
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 INDITPNKTESLKFCLLNLSERAICWNRCKPTRPK 323
           +N++     E+ ++C LN+ E   C    KP RPK
Sbjct: 39  VNEVPEALCENGRYCCLNIKELEACKKITKPPRPK 73


>AY358796-1|AAQ89156.1|   99|Homo sapiens DEFB127 protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 INDITPNKTESLKFCLLNLSERAICWNRCKPTRPK 323
           +N++     E+ ++C LN+ E   C    KP RPK
Sbjct: 39  VNEVPEALCENGRYCCLNIKELEACKKITKPPRPK 73


>AL360078-3|CAC17685.1|   99|Homo sapiens defensin, beta 127
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 INDITPNKTESLKFCLLNLSERAICWNRCKPTRPK 323
           +N++     E+ ++C LN+ E   C    KP RPK
Sbjct: 39  VNEVPEALCENGRYCCLNIKELEACKKITKPPRPK 73


>AF525929-1|AAP47222.1|   99|Homo sapiens beta-defensin 27 precursor
           protein.
          Length = 99

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 INDITPNKTESLKFCLLNLSERAICWNRCKPTRPK 323
           +N++     E+ ++C LN+ E   C    KP RPK
Sbjct: 39  VNEVPEALCENGRYCCLNIKELEACKKITKPPRPK 73


>X67884-1|CAA48083.1|  126|Homo sapiens immunoglobulin VH6 protein.
          Length = 126

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 177 TINTTASQTAASLLINDITPNKTESLKFCLLNLSERAICWNRCKP 311
           TIN   S+   SL +N +TP  T ++ +C        +C+N   P
Sbjct: 72  TINPDTSKNQFSLQLNSVTPEDT-AVYYCARGYCTNGVCYNWFDP 115


>DQ232881-1|ABB18374.1|  868|Homo sapiens LIN41 protein.
          Length = 868

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 92  VANTKKPPQQT--AGKPFGANANGGRRHVANHQH 187
           VA   +PP +   AG P GA  +   RH A+H H
Sbjct: 124 VATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAH 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,002,628
Number of Sequences: 237096
Number of extensions: 1691199
Number of successful extensions: 4213
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4211
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)