Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120904.seq
         (645 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m...    30   1.1  
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem...    29   2.0  
At1g16400.1 68414.m01961 cytochrome P450 family protein similar ...    28   6.1  
At4g38200.1 68417.m05392 guanine nucleotide exchange family prot...    27   8.1  
At3g58760.1 68416.m06549 ankyrin protein kinase, putative simila...    27   8.1  
At1g16410.2 68414.m01962 cytochrome P450, putative similar to gb...    27   8.1  
At1g16410.1 68414.m01963 cytochrome P450, putative similar to gb...    27   8.1  

>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
           membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
           to SP|O22218 Calcium-transporting ATPase 4, plasma
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
           {Arabidopsis thaliana}
          Length = 1030

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 190 VVLMVCNMSTAAICVCAEGFAGGXXXXXXRVCDMLLPVSISSIS 59
           ++LMVC + +  + V  EGF  G       +  +LL V +++IS
Sbjct: 172 IILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAIS 215


>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA11)
           identical to SP|Q9M2L4|ACAB_ARATH Potential
           calcium-transporting ATPase 11, plasma membrane-type (EC
           3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
           thaliana}; strong similarity to calmodulin-stimulated
           calcium-ATPase [Brassica oleracea] GI:1805654
          Length = 1025

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 190 VVLMVCNMSTAAICVCAEGFAGGXXXXXXRVCDMLLPVSISSIS 59
           ++LMVC + +  + V  EGF  G       +  ++L V +++IS
Sbjct: 172 IILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAIS 215


>At1g16400.1 68414.m01961 cytochrome P450 family protein similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family; identical
           to cytochrome P450 CYP79F2 (CYP79F2) GI:10946207
          Length = 537

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 338 IETVNVLDFLGSVYDNTIQVIVTE*VCVVGHDERYRVVFGNKQIAVKN 481
           IE  N++ ++ S+Y  +  V V E   V G+    R++FG + +  +N
Sbjct: 165 IEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKEN 212


>At4g38200.1 68417.m05392 guanine nucleotide exchange family protein
            similar to Brefeldin A-inhibited guanine
            nucleotide-exchange protein 2 [Homo sapiens] SP|Q9Y6D5;
            contains Pfam profile PF01369: Sec7 domain
          Length = 1698

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 210  SLLINDITPNKTESLKFCLLNLSERAICWN 299
            S   +D++ N    L+FC L L++  + WN
Sbjct: 1209 STFTSDVSLNAIAFLRFCALKLADGGLVWN 1238


>At3g58760.1 68416.m06549 ankyrin protein kinase, putative similar
           to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674
          Length = 471

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 329 LNRIETVNVLDFLGSVYDNTIQVIVTE 409
           L +I   NV+ FLG+V  +T  +IVTE
Sbjct: 213 LQKIRHPNVVQFLGAVTQSTPMMIVTE 239


>At1g16410.2 68414.m01962 cytochrome P450, putative similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family
          Length = 423

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 338 IETVNVLDFLGSVYDNTIQVIVTE*VCVVGHDERYRVVFGNKQIAVKN 481
           IE  N++ ++ S+Y  +  V V E   V G+    R++FG + +  +N
Sbjct: 166 IEADNLIAYVHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKEN 213


>At1g16410.1 68414.m01963 cytochrome P450, putative similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family
          Length = 538

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 338 IETVNVLDFLGSVYDNTIQVIVTE*VCVVGHDERYRVVFGNKQIAVKN 481
           IE  N++ ++ S+Y  +  V V E   V G+    R++FG + +  +N
Sbjct: 166 IEADNLIAYVHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKEN 213


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,137,687
Number of Sequences: 28952
Number of extensions: 256240
Number of successful extensions: 678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)