Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120903.seq
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.71 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.71 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.7  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 402 PTPSYIDPGLFFAQPGILC 346
           P PS IDPG      G LC
Sbjct: 153 PNPSIIDPGPALPPAGFLC 171


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 402 PTPSYIDPGLFFAQPGILC 346
           P PS IDPG      G LC
Sbjct: 153 PNPSIIDPGPALPPTGFLC 171


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 565 CWTEISCKTTDMEV 606
           CW   SCK T  EV
Sbjct: 492 CWVPHSCKLTSKEV 505


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 1   RHEPVRLAKRWWRYKNHPGRSTRLQRWKS 87
           RHE  R A    R    P RS+  Q+W++
Sbjct: 338 RHEVTRPAAPANRGNGFPKRSSDEQQWRN 366


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -2

Query: 500 ICIINVFHVPLFERVRNKQYISRQMHNVKNKLGRRRV 390
           IC   + ++ +F +  N+Q + +++     ++G+R+V
Sbjct: 323 ICYKLLSNLGIFPKTTNEQLLRKELLLFAEQMGQRQV 359


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 608 NTSMSVVLQLISVQH 564
           N  M++VLQ I++QH
Sbjct: 209 NIVMALVLQFITLQH 223


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 608 NTSMSVVLQLISVQH 564
           N  M++VLQ I++QH
Sbjct: 209 NIVMALVLQFITLQH 223


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 608 NTSMSVVLQLISVQH 564
           N  M++VLQ I++QH
Sbjct: 209 NIVMALVLQFITLQH 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,759
Number of Sequences: 336
Number of extensions: 3626
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)