Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120902.seq
(644 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 92 9e-18
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 66 5e-10
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 66 5e-10
UniRef50_P41701 Cluster: Occlusion-derived virus envelope protei... 57 3e-07
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 55 2e-06
UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep: O... 52 1e-05
UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:... 45 0.002
UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5; Nucleopolyh... 43 0.007
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 40 0.051
UniRef50_O10371 Cluster: Occlusion-derived virus envelope protei... 35 1.5
UniRef50_Q622H5 Cluster: Putative uncharacterized protein CBG021... 34 3.4
UniRef50_A6GL94 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi nucleopo... 33 7.8
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 92.3 bits (219), Expect = 9e-18
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 1 LVKHVFSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLIPD 141
LVKH FSNTVPAYLL+RGDYES+SELKSLRDLNPWVQNTLL+LLI D
Sbjct: 425 LVKHTFSNTVPAYLLVRGDYESTSELKSLRDLNPWVQNTLLELLIVD 471
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/38 (76%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKL 622
VTEI+NSD+K+QK Y+L EFD+KNL+SLESY+TLKIKL
Sbjct: 15 VTEIINSDDKLQKEYDLTEFDVKNLNSLESYDTLKIKL 52
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/46 (73%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = +1
Query: 1 LVKHVFSNTVPAYLLIRGDYESSSELKSLRDL-NPWVQNTLLKLLI 135
L +++F NTVPAYLLIRGDYESS KSL +L N WVQNTLLKLLI
Sbjct: 426 LTRYIFGNTVPAYLLIRGDYESS--FKSLHELKNSWVQNTLLKLLI 469
>UniRef50_P41701 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 62
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
Frame = +1
Query: 373 PPSATG-FMNPLNATMRANPFMNTPQRQML 459
PP+A G F+NPLNATMRANPFMNTPQRQML
Sbjct: 33 PPNALGGFVNPLNATMRANPFMNTPQRQML 62
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 509 VTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKL 622
VTE+ ++ KI+KTY+L EFDLKNLSSLES+E K+KL
Sbjct: 12 VTEVKPNNAKIRKTYDLNEFDLKNLSSLESFENTKVKL 49
>UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep:
ORF11 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 470
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +1
Query: 10 HVFSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLI 135
H F N YLLIRGDYES S++K L+DL P VQN + +L+I
Sbjct: 421 HKFINGSSVYLLIRGDYESISDIKLLKDLTPLVQNAVFQLVI 462
>UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:
ODV-E18 - Mamestra configurata NPV-A
Length = 83
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/31 (67%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +1
Query: 373 PPSATG--FMNPLNATMRANPFMNTPQRQML 459
PP G F+NPLNATMRANPF+N QR ML
Sbjct: 53 PPGGGGNTFVNPLNATMRANPFVNPAQRNML 83
>UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5;
Nucleopolyhedrovirus|Rep: LdOrf-odv-e18 peptide -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 88
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1
Query: 376 PSATGFMNPLNATMRANPFMNTPQRQML 459
P + NPLNATMRANPF+N QR ML
Sbjct: 61 PQRYAYTNPLNATMRANPFVNNAQRSML 88
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 39.9 bits (89), Expect = 0.051
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 509 VTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKL 622
VTEIVN +K+ K +EL E + KNL+SL SY+ ++
Sbjct: 10 VTEIVNGHDKLTKEFELDELNDKNLNSLVSYDNFNTRM 47
>UniRef50_O10371 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 85
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 376 PSATGFMN-PLNATMRANPFMNTPQR 450
P+A M PLN TMRANPF+ TPQR
Sbjct: 59 PAAVPQMGFPLNTTMRANPFVATPQR 84
>UniRef50_Q622H5 Cluster: Putative uncharacterized protein CBG02193;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG02193 - Caenorhabditis
briggsae
Length = 975
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +2
Query: 494 QQSSNVTEIVNSDEKIQKTYELAEFDLKNLSSLESYE-----TLKIKLGAQQIHG 643
+++ VTE++ + EK+++ +A KNL ++S E T KI G Q HG
Sbjct: 861 ERAGLVTELITTKEKLKECQSIASLQAKNLEQIQSLEEELKSTKKILEGRQNSHG 915
>UniRef50_A6GL94 Cluster: Putative uncharacterized protein; n=1;
Limnobacter sp. MED105|Rep: Putative uncharacterized
protein - Limnobacter sp. MED105
Length = 652
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 491 MQQSSNVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLGA 628
+QQ ++ ++DE Q +LA L+ L S E YET K KL A
Sbjct: 231 LQQREAAKQLTDADETAQGLLQLAGTTLQELMSDEGYETAKAKLEA 276
>UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Odv-e18 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 68
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 158 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTI 256
MIY D S NYLN+LTPN FL I
Sbjct: 1 MIYTDPTTGATTNTDATSNNYLNKLTPNTFLII 33
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,931,923
Number of Sequences: 1657284
Number of extensions: 8220297
Number of successful extensions: 17500
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17498
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -