Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120902.seq
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.3  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   6.3  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 590  NCLDFLNQIRPIRRFFGSFHRCLQFR 513
            NC++F  + +PIRR+    HR +Q++
Sbjct: 1144 NCIEFALKAKPIRRYIPK-HR-IQYK 1167


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 422 LIPL*TRLKGKCCR*VYKNETCQMQQSSNVTEIVNSDEKIQKTYELAE-FDLKNLSSLES 598
           L PL TRL+G CC      +      + +++ +  S +KI+   E  E F   + + L  
Sbjct: 662 LHPLITRLEGICC----DQDDLVNAYADDISVVTTSSQKIELVREAFEAFGRVSGARLNV 717

Query: 599 YETLKIKLG 625
            +T+ + +G
Sbjct: 718 DKTIALDVG 726


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,165
Number of Sequences: 2352
Number of extensions: 10129
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)