Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120900.seq
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.1  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   9.4  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   9.4  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 252  FRYFCATSSSNKC 290
            F  FC+T SSN C
Sbjct: 1622 FNLFCSTGSSNSC 1634


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 527 SXRFPKXKWPXLTXT 571
           S R+P  KWP L  T
Sbjct: 174 SERYPAAKWPVLAFT 188


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 165 EFNKCXVSIKSSFENQANNTDNIHNVKNIF 254
           E +KC   +KS  + Q ++ + +  VK +F
Sbjct: 351 ELDKCESFVKSGSKTQQSDLEKLVAVKRMF 380


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,117
Number of Sequences: 2352
Number of extensions: 9856
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)