Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120898.seq
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 62 3e-10
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 61 5e-10
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 56 1e-08
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 49 3e-06
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 46 2e-05
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 44 8e-05
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 43 2e-04
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 42 3e-04
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 41 6e-04
04_04_0048 + 22351788-22352177,22353175-22353711 39 0.003
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 39 0.003
07_03_0117 + 13589997-13590998 38 0.004
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 38 0.004
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 38 0.006
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 38 0.007
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 34 0.068
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 34 0.090
01_01_0877 - 6878905-6879600,6880696-6880968 33 0.16
09_04_0437 - 17587944-17588909 32 0.36
09_04_0303 - 16505782-16506902,16507232-16507292 31 0.84
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 29 1.9
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 28 4.5
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 28 4.5
06_01_0755 + 5648872-5649471,5650092-5650453,5650576-5650619,565... 28 5.9
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 5.9
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 27 7.8
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 27 7.8
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127 27 7.8
03_01_0534 + 3996479-3997458,3997938-3998265 27 7.8
02_02_0123 + 7015905-7015928,7015975-7016105,7017675-7017940,701... 27 7.8
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQ-HVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G+SAAVSKTA PIER+KLL+Q Q + K KGI D F R K++G+++ WRGN
Sbjct: 88 GVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSHPYKGIADCFGRTIKDEGVIALWRGN 147
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFS 512
NVIRYFPTQALNFAFK K++F+
Sbjct: 150 NVIRYFPTQALNFAFKDHFKRMFN 173
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 61.3 bits (142), Expect = 5e-10
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQ-HVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G+SAAVSKTA PIERVKLL+Q Q + K + KGI D F R K++G S WRGN
Sbjct: 90 GVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGN 149
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFS 512
NVIRYFPTQALNFAFK K++F+
Sbjct: 152 NVIRYFPTQALNFAFKDYFKRLFN 175
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQ-HVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G +A V+KT P+ERVKLLLQ Q + ++ + + +GI DAF R+ +E+G+ + WRGN
Sbjct: 32 GAAAVVAKTGAAPVERVKLLLQNQAEMLRRGSLTRPYRGIADAFGRVLREEGVAALWRGN 91
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVF 509
NVIRYFPTQA NFAFKG K +F
Sbjct: 94 NVIRYFPTQAFNFAFKGYFKSIF 116
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 251 GCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAAD-QRXKGIVDAFVRIPKEQGLLSFWR 427
G + AV T V PIER KLLLQ Q + + +R +G D R +++G+LS WR
Sbjct: 55 GAAMGGAVH-TVVAPIERAKLLLQTQDGNAALLGRARRFRGFADCVARTVRDEGVLSLWR 113
Query: 428 GN 433
GN
Sbjct: 114 GN 115
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 444 VIRYFPTQALNFAFKGKXKQVFSAALT 524
VIRY+P+ ALNF+ K + + A T
Sbjct: 119 VIRYYPSVALNFSLKDLYRSILKDAGT 145
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G++ AVSKT P+ R+ +L QVQ + +A R I RI E+G +FW+GN
Sbjct: 44 GVAGAVSKTCTAPLARLTILFQVQGMHSDVAT-MRKTSIWREASRIVYEEGFRAFWKGNL 102
Query: 437 XQRHQVLP 460
LP
Sbjct: 103 VTIAHRLP 110
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHV---------SKQIAADQRXKGIVDAFVRIPKEQG 409
G++ V+KTAV P+ERVK+L Q + + A+ G++ +F I + +G
Sbjct: 33 GVAGGVAKTAVAPLERVKILFQARSPLTFECFFWNFQTRRAEFHGSGLIGSFRTISRTEG 92
Query: 410 LLSFWRGNFXQRHQVLP 460
LL F+RGN +++P
Sbjct: 93 LLGFYRGNGASVARIVP 109
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G + AVSKT P+ R+ +L QV + +AA ++ I RI +E+G +FW+GN
Sbjct: 16 GFAGAVSKTCTAPLARLTILFQVAGMHSDVAALKKYS-IWHEASRIVREEGFGAFWKGN 73
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/68 (29%), Positives = 43/68 (63%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G++ A SKTA+ P+ER+K+LLQ + + + ++ G++ + ++ + G+L F++GN
Sbjct: 35 GVAGAFSKTAIAPLERLKILLQTR--TNEFSS----LGVLKSLKKLKQHDGILGFYKGNG 88
Query: 437 XQRHQVLP 460
+++P
Sbjct: 89 ASVLRIVP 96
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G++ VS+TAV P+ER+K+LLQVQ+ + G + I + +GL ++GN
Sbjct: 51 GVAGGVSRTAVAPLERMKILLQVQN-----PHSIKYNGTIQGLKYIWRTEGLRGLFKGNG 105
Query: 437 XQRHQVLPD 463
+++P+
Sbjct: 106 TNCARIVPN 114
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 218 RRSGRVR*GLPGCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIP 397
R +G + L G G+S V++ P + +K+ +Q R GI DAF +I
Sbjct: 111 RDAGLLEKALAG-GVSGVVAQVVASPADLIKVRMQADSRLLSQGIQPRYTGIFDAFTKIV 169
Query: 398 KEQGLLSFWRG 430
+ +G W+G
Sbjct: 170 RAEGFRGLWKG 180
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 38.7 bits (86), Expect = 0.003
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +2
Query: 155 ATPTSTYSPSEDHIIEQNVEPRRSG---RVR*GLPGCGISAAVSKTAVXPIERVKLLLQV 325
AT SE ++E+ E R + L ++A VS+T V P+ER+KL
Sbjct: 98 ATEEEVAEASEGKVVEEVKEARAGAGAMNMTKHLWSGAVAAMVSRTVVAPLERLKL---- 153
Query: 326 QHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
+++ + A+QR + + I QGL FW+GNF
Sbjct: 154 EYI---VRAEQR--NLFELIHAIATTQGLKGFWKGNF 185
>07_03_0117 + 13589997-13590998
Length = 333
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G++ V+KTAV P+ERV L+ +Q+ A R G V I + +G+ +RGN
Sbjct: 49 GVAGVVAKTAVAPLERVNLM-------RQVGAAPRGAGAVQMLREIGRGEGVAGLFRGN 100
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 GCG-ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWR 427
GCG +S A+ T V P++ ++ LQ Q + + A +G+ D F R + +G+ F++
Sbjct: 430 GCGTVSGALGATCVYPLQVIRTRLQAQRANSESA----YRGMSDVFWRTLQHEGVSGFYK 485
Query: 428 GNFXQRHQVLP 460
G +V+P
Sbjct: 486 GILPNLLKVVP 496
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A +KTAV P+ERVK+LLQ + Q GI+ + ++ + +G+ F++GN
Sbjct: 37 GAAGAFAKTAVAPLERVKILLQTRTHGFQ------SLGILQSLRKLWQYEGIRGFYKGNG 90
Query: 437 XQRHQVLP 460
+++P
Sbjct: 91 ASVLRIVP 98
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 GCG-ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWR 427
GCG +S A+ T V P++ ++ LQ Q + + A +G+ D F + + +G+ F++
Sbjct: 431 GCGTVSGALGATCVYPLQVIRTRLQAQRANSEAA----YRGMSDVFWKTLQHEGISGFYK 486
Query: 428 GNFXQRHQVLP 460
G +V+P
Sbjct: 487 GLVPNLLKVVP 497
Score = 36.3 bits (80), Expect = 0.017
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G+S A S+TA P++R+K+++QVQ + +I Q K I +E L F+RGN
Sbjct: 241 GVSGATSRTATAPLDRLKVIMQVQ--TNRITVLQAVKDIW-------REGSLRGFFRGNG 291
Query: 437 XQRHQVLPD 463
+V P+
Sbjct: 292 LNVVKVAPE 300
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 34.3 bits (75), Expect = 0.068
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 260 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXK--GIVDAFVRIPKEQGLLSFWRG 430
I+A ++ P++ K+ LQ+Q K +AAD K G++ I +E+G + W+G
Sbjct: 21 IAACFAEVCTIPLDTAKVRLQLQ---KNVAADAAPKYRGLLGTAATIAREEGAAALWKG 76
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 263 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
+ A++ + P + VK+ LQ + A +R G +DA+ +I +++G + W G
Sbjct: 126 TGAIAISIANPTDLVKVRLQAEGKLAP-GAPRRYAGAMDAYAKIVRQEGFAALWTG 180
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 33.9 bits (74), Expect = 0.090
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
GI+ AVS+TAV P+E ++ L V + F I K +G +RGNF
Sbjct: 142 GIAGAVSRTAVAPLETIRTHLMV---------GSNGNSTAEVFQSIMKHEGWTGLFRGNF 192
Query: 437 XQRHQVLP 460
+V P
Sbjct: 193 VNVIRVAP 200
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G++ S P++ VK LQ Q R +GI D F R +E+GL WRG
Sbjct: 231 GLAGVASWVCCYPLDVVKSRLQAQ------GYPPRYRGIADCFRRSVREEGLPVLWRG 282
>09_04_0437 - 17587944-17588909
Length = 321
Score = 31.9 bits (69), Expect = 0.36
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 230 RVR*GLPGCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRX-KGIVDAFVRIPKEQ 406
+V GL G+ AAV A + R+ Q + AA +R + + DA VR+ +++
Sbjct: 129 KVAAGLFSGGVGAAVGNPADVAMVRM------QADGRLPAAQRRNYRSVADAIVRMARDE 182
Query: 407 GLLSFWRGN 433
G+ S WRG+
Sbjct: 183 GVCSLWRGS 191
>09_04_0303 - 16505782-16506902,16507232-16507292
Length = 393
Score = 30.7 bits (66), Expect = 0.84
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 251 GCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G G+ +AVS TA+ P +K LQV AA A I + +G L+F+RG
Sbjct: 75 GAGLFSAVS-TALYPAVVLKTRLQVAPSPAHAAASSLPPSAAAAATAILRSEGPLAFYRG 133
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 260 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNFX 439
++ AVS+T V P+E ++ L V + + F I K +G +RGNF
Sbjct: 145 VAGAVSRTCVAPLETIRTHLMV---------GSNGDSMTEVFQSIMKTEGWTGLFRGNFV 195
Query: 440 QRHQVLP 460
+V P
Sbjct: 196 NVIRVAP 202
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 293 PIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
PI VK LQ+Q S + R G DA I KE+G L+ +RG
Sbjct: 137 PIWLVKTRLQLQTPSHHTS---RYSGFSDALRTILKEEGWLALYRG 179
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 28.3 bits (60), Expect = 4.5
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 27/87 (31%)
Frame = +2
Query: 263 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVD-------------AFVR---- 391
+ AV+KT P++RVKLL+Q V + ++ G ++ AFVR
Sbjct: 99 AGAVAKTITAPLDRVKLLMQTHSVRVVGESTKKGIGFLEKFENYSGKHIMKKAFVRHGAF 158
Query: 392 ----------IPKEQGLLSFWRGNFXQ 442
I KE+GL +W+GN Q
Sbjct: 159 FFKKEPAIAEIGKEEGLKGYWKGNLPQ 185
>06_01_0755 +
5648872-5649471,5650092-5650453,5650576-5650619,
5651324-5651538,5651643-5651767,5651862-5651931
Length = 471
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 242 GLPGCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSF 421
G+ CG++ AV P++ VK +Q+ + K I F + KEQG+ F
Sbjct: 178 GIASCGLT----HMAVTPLDLVKCNMQIDPA--------KYKSITSGFGILAKEQGVRGF 225
Query: 422 WRG 430
+RG
Sbjct: 226 FRG 228
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 110 KNQELVFRDPXSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GL 247
K + + F DP C T T +P DH+ +N P+ + GL
Sbjct: 604 KKEPIGFLDPTQICQTQHTVTLAPGSDHLKGKN--PKEIAEYKKGL 647
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 257 GISAAVSKTAVX-PIERVKLLLQV-QHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G A + T V P+ VK LQ Q + + + + R G +DA +++ + +GL F++G
Sbjct: 260 GAIAKLGATVVTYPLLVVKSRLQAKQEIGRNVMS--RYTGTIDAIIKMIRYEGLHGFYKG 317
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 221 RSGRVR*GLPGCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPK 400
RS VR G ++ A+SK + P+E ++ + V S+ I +FV I +
Sbjct: 88 RSREVREFASGA-LAGAMSKAVLAPLETIRTRMVVGVGSRHIGG---------SFVEIIE 137
Query: 401 EQGLLSFWRGNFXQRHQVLP 460
+ G W GN +++P
Sbjct: 138 QNGWQGLWAGNTINMIRIIP 157
>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
Length = 649
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 115 IFEQEIWSNFVITGAQRVGVCLF*NSIDHV 26
+FEQ I SN ++T A GV NS+ H+
Sbjct: 20 LFEQVIGSNVIVTEAPLTGVTAEGNSVLHI 49
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 GISAAVSKTAVX-PIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G+SAA++ V P++ + L VQ ++ R +G VDAF +I G+ +RG
Sbjct: 140 GVSAAIAAQVVWTPVDVISQRLMVQ-----TSSTCRYRGGVDAFKKILLADGVRGLYRG 193
>02_02_0123 +
7015905-7015928,7015975-7016105,7017675-7017940,
7018239-7018327,7018716-7018811,7018874-7018969,
7019121-7019251,7020123-7020177,7020645-7020800,
7021238-7021306,7021392-7021499,7022128-7022196,
7022743-7022797,7023031-7023227
Length = 513
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 257 GISAAVSKTAVX-PIERVKLLLQV-QHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G A + T V P+ VK LQ Q + + + + R G +DA +++ + +GL F++G
Sbjct: 412 GAIAKLGATVVTYPLLVVKSRLQAKQEIGRNVMS--RYTGTIDAIIKMIRYEGLHGFYKG 469
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,268,539
Number of Sequences: 37544
Number of extensions: 215666
Number of successful extensions: 630
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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