Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120898.seq
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 94 7e-20
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 93 9e-20
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 93 9e-20
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 93 9e-20
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 93 1e-19
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 89 3e-18
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 40 0.001
CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical... 35 0.035
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 34 0.081
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 34 0.081
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 33 0.14
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 31 0.43
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 31 0.76
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 31 0.76
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 31 0.76
U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 28 5.3
Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 93.9 bits (223), Expect = 7e-20
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G+SA+VSKT V PIERVK+LLQVQ+ K I AD+R GI+DAFVR+PKEQG +SFWRGN
Sbjct: 29 GVSASVSKTVVAPIERVKILLQVQYSHKDIPADKRYNGIIDAFVRVPKEQGFVSFWRGN 87
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRS 536
NVIRYFPTQA NFAF K + + R +
Sbjct: 90 NVIRYFPTQAFNFAFNDLYKSILLKNMKRENN 121
Score = 27.5 bits (58), Expect = 7.0
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 185 EDHIIEQNVEPRRSGRVR*GLPGCGISAAVSKTAVXPIE--RVKLLLQVQHVSKQIAADQ 358
E++++ +V SG GL GC S V P++ R +L + H +K+
Sbjct: 119 ENNVLSYSVRTLVSG----GLAGCS-----SLCIVYPLDFIRTRLSADINHHTKR----- 164
Query: 359 RXKGIVDAFVRIPKEQGLLSFWRG 430
KG+VD ++ K +G + +RG
Sbjct: 165 EYKGLVDCTMKTVKNEGFSALYRG 188
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 93.5 bits (222), Expect = 9e-20
Identities = 47/98 (47%), Positives = 57/98 (58%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G +AAVSKTAV PIERVKLLLQVQ SK IA D+R KGI+D +R+PKEQG+ + WRGN
Sbjct: 20 GTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 437 XQRHQVLPDPXXXXXXXXXXXXXXXXXXDKKTQFXRYF 550
+ P DKK F ++F
Sbjct: 80 ANVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWKFF 117
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRSSXVTSAGNL 563
NVIRYFPTQA+NFAFK K +F L +++ AGNL
Sbjct: 81 NVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWKFFAGNL 121
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 93.5 bits (222), Expect = 9e-20
Identities = 47/98 (47%), Positives = 57/98 (58%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G +AAVSKTAV PIERVKLLLQVQ SK IA D+R KGI+D +R+PKEQG+ + WRGN
Sbjct: 20 GTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 437 XQRHQVLPDPXXXXXXXXXXXXXXXXXXDKKTQFXRYF 550
+ P DKK F ++F
Sbjct: 80 ANVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWKFF 117
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRSSXVTSAGNL 563
NVIRYFPTQA+NFAFK K +F L +++ AGNL
Sbjct: 81 NVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWKFFAGNL 121
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L + K A D+ KG+ D ++I K G + +RG F
Sbjct: 125 GAAGATSLCFVYPLDFARTRLAAD-IGK--ANDREFKGLADCLIKIVKSDGPIGLYRGFF 181
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 93.5 bits (222), Expect = 9e-20
Identities = 47/98 (47%), Positives = 57/98 (58%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G +AAVSKTAV PIERVKLLLQVQ SK IA D+R KGI+D +R+PKEQG+ + WRGN
Sbjct: 20 GTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 437 XQRHQVLPDPXXXXXXXXXXXXXXXXXXDKKTQFXRYF 550
+ P DKK F ++F
Sbjct: 80 ANVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWKFF 117
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRSSXVTSAGNL 563
NVIRYFPTQA+NFAFK K +F L +++ AGNL
Sbjct: 81 NVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWKFFAGNL 121
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L + K A D+ KG+ D ++I K G + +RG F
Sbjct: 125 GAAGATSLCFVYPLDFARTRLAAD-IGK--ANDREFKGLADCLIKIVKSDGPIGLYRGFF 181
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 93.1 bits (221), Expect = 1e-19
Identities = 49/98 (50%), Positives = 56/98 (57%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G +AAVSKTAV PIERVKLLLQVQ S IAAD+R KGIVD VR+PKEQG + WRGN
Sbjct: 33 GTAAAVSKTAVAPIERVKLLLQVQDASLTIAADKRYKGIVDVLVRVPKEQGYAALWRGNL 92
Query: 437 XQRHQVLPDPXXXXXXXXXXXXXXXXXXDKKTQFXRYF 550
+ P DKK F ++F
Sbjct: 93 ANVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWKFF 130
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRSSXVTSAGNL 563
NVIRYFPTQALNFAFK K +F L +++ AGNL
Sbjct: 94 NVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWKFFAGNL 134
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L V K A ++ KG+ D V+I K G + +RG F
Sbjct: 138 GAAGATSLCFVYPLDFARTRLAAD-VGK--ANEREFKGLADCLVKIAKSDGPIGLYRGFF 194
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 93.1 bits (221), Expect = 1e-19
Identities = 49/98 (50%), Positives = 56/98 (57%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G +AAVSKTAV PIERVKLLLQVQ S IAAD+R KGIVD VR+PKEQG + WRGN
Sbjct: 33 GTAAAVSKTAVAPIERVKLLLQVQDASLTIAADKRYKGIVDVLVRVPKEQGYAALWRGNL 92
Query: 437 XQRHQVLPDPXXXXXXXXXXXXXXXXXXDKKTQFXRYF 550
+ P DKK F ++F
Sbjct: 93 ANVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWKFF 130
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRSSXVTSAGNL 563
NVIRYFPTQALNFAFK K +F L +++ AGNL
Sbjct: 94 NVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWKFFAGNL 134
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L V K A ++ KG+ D V+I K G + +RG F
Sbjct: 138 GAAGATSLCFVYPLDFARTRLAAD-VGK--ANEREFKGLADCLVKIAKSDGPIGLYRGFF 194
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 89.0 bits (211), Expect = 2e-18
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
G +AAVSKTAV PIERVKLLLQVQ SK IA D+R KGI+D +R+PKEQG+ + WRGN
Sbjct: 20 GTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGN 78
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 88.6 bits (210), Expect = 3e-18
Identities = 43/98 (43%), Positives = 56/98 (57%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G +AA+SKTAV PIERVKLLLQV VS+ + AD++ KGI+D R+PKEQG +FWRGN
Sbjct: 20 GTAAAISKTAVAPIERVKLLLQVSDVSETVTADKKYKGIMDVLARVPKEQGYAAFWRGNL 79
Query: 437 XQRHQVLPDPXXXXXXXXXXXXXXXXXXDKKTQFXRYF 550
+ P DK +F ++F
Sbjct: 80 ANVLRYFPTQALNFAFKDTYKKMFQEGIDKNKEFWKFF 117
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 441 NVIRYFPTQALNFAFKGKXKQVFSAALTRRRSSXVTSAGNL 563
NV+RYFPTQALNFAFK K++F + + + AGNL
Sbjct: 81 NVLRYFPTQALNFAFKDTYKKMFQEGIDKNKEFWKFFAGNL 121
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ V+ L V K + D+ +G+ D FV+I K G + +RG F
Sbjct: 125 GAAGATSLCFVYPLDFVRTRLGAD-VGKGV--DREFQGLTDCFVKIVKSDGPIGLYRGFF 181
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 83.0 bits (196), Expect = 1e-16
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = +2
Query: 263 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
+AA+SKT + P+ERVKL+LQ+Q+ +A + R KGIVD F+R+P+EQG LSFWRGN+
Sbjct: 28 AAAISKTVIAPVERVKLILQLQNSQTTLALENRYKGIVDCFIRVPREQGFLSFWRGNW 85
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +2
Query: 263 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNFXQ 442
+AA+SKT P +RVKL+LQ+Q S+ A+ GI D +I EQG ++ WRGN
Sbjct: 23 AAAISKTTTAPFDRVKLVLQLQRQSEFAMAE--YNGIRDCISKIRLEQGAMALWRGNGAG 80
Query: 443 RHQVLPD 463
+ LP+
Sbjct: 81 VARCLPN 87
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 260 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNFX 439
++ A TAV PI+ VK +Q Q S + K +D F ++ K +GLL +RG
Sbjct: 378 VAGACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLP 437
Query: 440 QRHQVLPD 463
Q V P+
Sbjct: 438 QIVGVAPE 445
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 287 VXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
V P + +K LQV + Q + G++D ++ KE+G +S W+G
Sbjct: 579 VTPADVIKTRLQVAARAGQTTYN----GVIDCARKLIKEEGPMSLWKG 622
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 257 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGNF 436
G++ A+S+T P +R+K+ LQV + G+V + E G+ SFWRGN
Sbjct: 252 GVAGAMSRTCTAPFDRIKVYLQVN------STKTNKLGVVSCVHLLHAEGGIKSFWRGNG 305
Query: 437 XQRHQVLPD 463
++ P+
Sbjct: 306 INVIKIAPE 314
>CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical
protein C42C1.10 protein.
Length = 313
Score = 35.1 bits (77), Expect = 0.035
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +2
Query: 263 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRGN 433
S V++ + P++ +K+ Q+Q + + KG++ + I +E+G +FW+G+
Sbjct: 25 SGIVTRMIIQPLDVLKIRFQLQEEPIRGKKSGKYKGVMQSIFLITREEGAHAFWKGH 81
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.081
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +2
Query: 251 GCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
GC A S A P ER+KLLLQ+Q A + G +DA ++ + GL S RG
Sbjct: 102 GCAAGMAQSVIAA-PTERIKLLLQIQ----DDKAHTKFNGPIDATKQLLRTHGLKSLTRG 156
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 33.9 bits (74), Expect = 0.081
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +2
Query: 251 GCGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
GC A S A P ER+KLLLQ+Q A + G +DA ++ + GL S RG
Sbjct: 102 GCAAGMAQSVIAA-PTERIKLLLQIQ----DDKAHTKFNGPIDATKQLLRTHGLKSLTRG 156
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 368 GIVDAFVRIPKEQGLLSFWRG 430
G+V+A RI KE+G+L+ WRG
Sbjct: 149 GVVNALTRITKEEGVLTLWRG 169
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 CG-ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
CG S +++ A P + VK+ +Q++ + + R G D F + + QG W G
Sbjct: 125 CGAFSGLIAQFAASPTDLVKVQMQMEGLRRLQKQPLRYTGATDCFRSLYRTQGFFGLWIG 184
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 GISAAVSKTAVX-PIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G A V T V P ER+K LLQVQ + G +D ++ K+ G+ S +RG
Sbjct: 111 GALAGVFTTIVMVPGERIKCLLQVQQAG-SAGSGVHYDGPLDVVKKLYKQGGISSIYRG 168
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 GISAAVSKTAVX-PIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G A V T V P ER+K LLQVQ + G +D ++ K+ G+ S +RG
Sbjct: 111 GALAGVFTTIVMVPGERIKCLLQVQQAG-SAGSGVHYDGPLDVVKKLYKQGGISSIYRG 168
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 GISAAVSKTAVX-PIERVKLLLQVQHVSKQIAADQRXKGIVDAFVRIPKEQGLLSFWRG 430
G A V T V P ER+K LLQVQ + G +D ++ K+ G+ S +RG
Sbjct: 111 GALAGVFTTIVMVPGERIKCLLQVQQAG-SAGSGVHYDGPLDVVKKLYKQGGISSIYRG 168
>U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical
protein T07F12.2 protein.
Length = 220
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 98 NLLFKNQELVFRDPXSACAATPTSTYSPS 184
N F+N E+V DP C A ++PS
Sbjct: 150 NKTFRNLEMVLADPVHGCEALRNEIFAPS 178
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 62 YPLCSRDYEITPNL-LFKNQELVFR-DPXSACAATPTSTYSPSEDHIIEQNVE 214
YPL RD + PN L FR P +A P+ST SE H ++VE
Sbjct: 105 YPLMKRD-NVFPNFALPTTTRAAFRIGPQPIASADPSSTPGSSEHHSDTEDVE 156
>Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical
protein F56H6.2 protein.
Length = 373
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 60 PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHI 176
PTL P + L + +C K+ S + P+LPP+ I
Sbjct: 89 PTLPVPTLRMLNEPTCQKVFSSWLKVSKEPQPKLPPKKI 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,041,298
Number of Sequences: 27780
Number of extensions: 170030
Number of successful extensions: 429
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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