Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120896.seq
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown prot...   160   2e-39
AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p pro...   160   2e-39
AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-P...   160   2e-39

>DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown
           protein.
          Length = 364

 Score =  160 bits (388), Expect = 2e-39
 Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = -3

Query: 636 YAGAQKNIGTSGVALVIVREDLLNQALPTMSLFIRLDS*LQTDSILNTPPMFAIYIMGRV 457
           YAGAQKNIG +G  ++IVR+DL+ + L      +  +   + +S+LNTPP F IY+MG V
Sbjct: 189 YAGAQKNIGPAGTTVIIVRDDLIGKHLKITPSILNFEQMDKNNSLLNTPPTFGIYVMGLV 248

Query: 456 LQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDD 280
            +WI+RNGG+ GM++LA  K+ LIY+TI QSNGFYY PV  NVRS+MNVPFRIG   GDD
Sbjct: 249 FKWIKRNGGVAGMAKLAAAKSKLIYDTINQSNGFYYCPVDVNVRSRMNVPFRIGSASGDD 308

Query: 279 ALEKEFL 259
           ALEKEFL
Sbjct: 309 ALEKEFL 315



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 31/49 (63%), Positives = 33/49 (67%)
 Frame = -2

Query: 277 LRKRILEGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMKEF 131
           L K  L  AE  G+IQLKGHR VGGIRAS+YNAVTL E Q L   M  F
Sbjct: 310 LEKEFLSKAEAEGMIQLKGHRSVGGIRASLYNAVTLAETQQLANLMLAF 358


>AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p
           protein.
          Length = 364

 Score =  160 bits (388), Expect = 2e-39
 Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = -3

Query: 636 YAGAQKNIGTSGVALVIVREDLLNQALPTMSLFIRLDS*LQTDSILNTPPMFAIYIMGRV 457
           YAGAQKNIG +G  ++IVR+DL+ + L      +  +   + +S+LNTPP F IY+MG V
Sbjct: 189 YAGAQKNIGPAGTTVIIVRDDLIGKHLKITPSILNFEQMDKNNSLLNTPPTFGIYVMGLV 248

Query: 456 LQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDD 280
            +WI+RNGG+ GM++LA  K+ LIY+TI QSNGFYY PV  NVRS+MNVPFRIG   GDD
Sbjct: 249 FKWIKRNGGVAGMAKLAAAKSKLIYDTINQSNGFYYCPVDVNVRSRMNVPFRIGSASGDD 308

Query: 279 ALEKEFL 259
           ALEKEFL
Sbjct: 309 ALEKEFL 315



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 31/49 (63%), Positives = 33/49 (67%)
 Frame = -2

Query: 277 LRKRILEGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMKEF 131
           L K  L  AE  G+IQLKGHR VGGIRAS+YNAVTL E Q L   M  F
Sbjct: 310 LEKEFLSKAEAEGMIQLKGHRSVGGIRASLYNAVTLAETQQLANLMLAF 358


>AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-PA
           protein.
          Length = 364

 Score =  160 bits (388), Expect = 2e-39
 Identities = 75/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = -3

Query: 636 YAGAQKNIGTSGVALVIVREDLLNQALPTMSLFIRLDS*LQTDSILNTPPMFAIYIMGRV 457
           YAGAQKNIG +G  ++IVR+DL+ + L      +  +   + +S+LNTPP F IY+MG V
Sbjct: 189 YAGAQKNIGPAGTTVIIVRDDLIGKHLKITPSILNFEQMDKNNSLLNTPPTFGIYVMGLV 248

Query: 456 LQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDD 280
            +WI+RNGG+ GM++LA  K+ LIY+TI QSNGFYY PV  NVRS+MNVPFRIG   GDD
Sbjct: 249 FKWIKRNGGVAGMAKLAAAKSKLIYDTINQSNGFYYCPVDVNVRSRMNVPFRIGSASGDD 308

Query: 279 ALEKEFL 259
           ALEKEFL
Sbjct: 309 ALEKEFL 315



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 31/49 (63%), Positives = 33/49 (67%)
 Frame = -2

Query: 277 LRKRILEGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMKEF 131
           L K  L  AE  G+IQLKGHR VGGIRAS+YNAVTL E Q L   M  F
Sbjct: 310 LEKEFLSKAEAEGMIQLKGHRSVGGIRASLYNAVTLAETQQLANLMLAF 358


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,288,431
Number of Sequences: 53049
Number of extensions: 593324
Number of successful extensions: 1293
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)