Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120895.seq
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-P...    30   2.3  
AY060753-1|AAL28301.1|  271|Drosophila melanogaster GH20409p pro...    30   3.1  
AE014134-406|AAF51257.1|  271|Drosophila melanogaster CG3557-PA ...    30   3.1  
BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p pro...    29   5.4  

>AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-PA
           protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +3

Query: 279 NFSILNCSCFEGRFLKNEFCRLANLNSLHEWED---KLYPEPDKNIVV 413
           +F+ L C   +  F   E CR+  +N  H++ D   KLY  P  NI++
Sbjct: 13  SFTNLKCEMIDRTFGNFEMCRIKAVNRTHKYIDINLKLYILPINNIMI 60


>AY060753-1|AAL28301.1|  271|Drosophila melanogaster GH20409p
           protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 361 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASP 474
           C++G +S  PS    S C S+P+     P    C ASP
Sbjct: 85  CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASP 122


>AE014134-406|AAF51257.1|  271|Drosophila melanogaster CG3557-PA
           protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 361 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASP 474
           C++G +S  PS    S C S+P+     P    C ASP
Sbjct: 85  CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASP 122


>BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 599 VFAKCCQIYCCVCECLRIEC*KTGQSCF 516
           +++ CC  YCC C C    C      CF
Sbjct: 5   IYSCCCCCYCCCCTCCCCCCCSCCCRCF 32


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,677,656
Number of Sequences: 53049
Number of extensions: 682267
Number of successful extensions: 2507
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)