Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120895.seq
         (646 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOA...    31   0.65 
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik...    30   1.1  
At2g37280.1 68415.m04573 ABC transporter family protein similar ...    30   1.5  
At5g55360.1 68418.m06898 long-chain-alcohol O-fatty-acyltransfer...    29   3.5  
At5g57655.2 68418.m07204 xylose isomerase family protein contain...    28   4.6  
At5g57655.1 68418.m07203 xylose isomerase family protein contain...    28   4.6  
At5g47690.1 68418.m05887 expressed protein                             28   4.6  
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ...    28   6.1  
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp...    27   8.1  
At1g50180.1 68414.m05627 disease resistance protein (CC-NBS-LRR ...    27   8.1  

>At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related  similar to wax
           synthase [gi:5020219] from Simmondsia chinensis
          Length = 341

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -3

Query: 116 WSSPLSTLSRFGWLSSLLESPILRLVAMLPTC 21
           W S L +LS   ++SS L   +LRL+++LP C
Sbjct: 12  WISALISLSYCYYISSKLSKGVLRLLSILPVC 43


>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like ABC
            transporter, Spirodela polyrrhiza, EMBL:Z70524
          Length = 1450

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 533  FFSIQYGDIHKHNNIFG-NILQRHFAKRFF 619
            F S QYGDIH+  N+FG +     F K +F
Sbjct: 1384 FISSQYGDIHEEINVFGQSTTVARFLKDYF 1413


>At2g37280.1 68415.m04573 ABC transporter family protein similar to
            PDR5-like ABC transporter GI:1514643 from [Spirodela
            polyrhiza]
          Length = 1413

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 533  FFSIQYGDIHKHNNIFG 583
            FFS QYGDIH+  N FG
Sbjct: 1347 FFSSQYGDIHQKINAFG 1363


>At5g55360.1 68418.m06898 long-chain-alcohol O-fatty-acyltransferase
           family protein / wax synthase family protein contains
           similarity to wax synthase similarity to wax synthase
           wax synthase - Simmondsia chinensis, PID:g5020219
           similar to wax synthase [gi:5020219] from Simmondsia
           chinensis
          Length = 342

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = -3

Query: 116 WSSPLSTLSRFGWLSSLLESPILRLVAMLPTCAV 15
           W S + ++S   +LS+ +++ + RL+++LP CA+
Sbjct: 12  WISAIISISYCYYLSTGIKAGVFRLLSVLPVCAL 45


>At5g57655.2 68418.m07204 xylose isomerase family protein contains
           similarity to Xylose isomerase (EC 5.3.1.5)
           (Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus]
          Length = 477

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 518 FWHVYGSKVGKPKSAGLALHSWTDGVRSLAVGR 420
           FWH +    G P  A      W DG  S+++ +
Sbjct: 89  FWHTFRGTGGDPFGAATKYWPWEDGTNSVSMAK 121


>At5g57655.1 68418.m07203 xylose isomerase family protein contains
           similarity to Xylose isomerase (EC 5.3.1.5)
           (Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus]
          Length = 287

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 518 FWHVYGSKVGKPKSAGLALHSWTDGVRSLAVGR 420
           FWH +    G P  A      W DG  S+++ +
Sbjct: 89  FWHTFRGTGGDPFGAATKYWPWEDGTNSVSMAK 121


>At5g47690.1 68418.m05887 expressed protein
          Length = 1638

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 43   KRKIGDSSSDDNQPKRERVESGEDQQLVPYN-NNNGAAFNVKHDE 174
            KR +GD++S  + PKR R  SG      PY  +N+G    +K  E
Sbjct: 1227 KRNVGDATSVVSVPKRRRSSSGHS----PYKFSNSGPKVQLKASE 1267


>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
           similar to DNA-binding protein DF1 [Pisum sativum]
           GI:13646986
          Length = 603

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 70  DDNQPKRERVESGEDQQLVPYNNNNGAAFN 159
           D+++ +    E G + +LVP NNNN    N
Sbjct: 572 DEDEEEENEEEEGGEFELVPSNNNNNKTTN 601


>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
           specific antioxidant / mal allergen family protein
           similar to type 2 peroxiredoxin [Brassica rapa subsp.
           pekinensis] GI:4928472; contains Pfam profiles PF00646:
           F-box domain, PF00578: AhpC/TSA family
          Length = 553

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 376 SSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPRFTLIAI 254
           S   C LF+L     +   NLP+  L+  I ++PR  + A+
Sbjct: 142 SGGDCSLFQLMKMTTTTMSNLPTDLLEEIISRVPRKYMRAV 182


>At1g50180.1 68414.m05627 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 857

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 270 KRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEW 371
           K  N  IL    FEG F+ ++ C   NL +L EW
Sbjct: 753 KLPNLKILQL--FEGSFVGSKLCCSKNLENLEEW 784


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,885,296
Number of Sequences: 28952
Number of extensions: 325741
Number of successful extensions: 1055
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)