Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120894.seq
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    26   0.97 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   6.8  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.0  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   9.0  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.8 bits (54), Expect = 0.97
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 420 PSQASTLPISGKFQAHDINNQQSQLVPGL 506
           P  AST P  G FQ+   NN  S ++PGL
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPGL 36


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 56   AISVTSFNFTHIR*IPSSCKILIPYSSSMAFTNLVDTLANTIHRDAITAPLVETA 220
            ++ + +F   H++    S  I+  YS       L   LAN +HR+A ++  ++ A
Sbjct: 1073 SMPIQAFEMIHLKTYQGS--IIQKYSRLSCILELDTMLANHLHREAFSSSELQKA 1125


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/36 (27%), Positives = 14/36 (38%)
 Frame = +3

Query: 393 PSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 500
           P     QQ+ S     P+  K + HD      +L P
Sbjct: 318 PQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 36  PRGNRHQQFPSQASTLP 86
           PRG+RH +  S+AS+ P
Sbjct: 836 PRGSRHTRQGSEASSPP 852


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 373 RDAITAPLVETAISNFRHKLQLYPYQVNSKLMT*TTNKVSLSLGFSLSMAFTNLVDTLAN 552
           R    A L   AI++    L   PY +NS      + +  L+ G++  + F ++   + +
Sbjct: 83  RSPTNAILTGLAIADLLVMLDYMPYAINSIPYLRLSREERLTYGWAWYIMFHSIFAQICH 142

Query: 553 TI 558
           TI
Sbjct: 143 TI 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,584
Number of Sequences: 2352
Number of extensions: 10183
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)