Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120892.seq
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF071881-1|AAC64041.1|  454|Drosophila melanogaster Hira isoform...    30   2.8  
BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro...    28   8.7  
AY069414-1|AAL39559.1|  437|Drosophila melanogaster LD11036p pro...    28   8.7  
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.      28   8.7  
AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog...    28   8.7  
AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P...    28   8.7  

>AF071881-1|AAC64041.1|  454|Drosophila melanogaster Hira isoform
           protein.
          Length = 454

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 508 YLR*CHIDNVTGIWDFTSXXNTITTIHG 591
           YL  C IDN   IWD     N++ T+ G
Sbjct: 160 YLASCSIDNTVIIWDARHFHNSVATLEG 187


>BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p
           protein.
          Length = 1047

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 508 YLR*CHIDNVTGIWDFTSXXNTITTIHG 591
           YL  C IDN   IWD  +  +++ T+ G
Sbjct: 143 YLASCSIDNTVIIWDAQAFPHSVATLKG 170


>AY069414-1|AAL39559.1|  437|Drosophila melanogaster LD11036p
           protein.
          Length = 437

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 508 YLR*CHIDNVTGIWDFTSXXNTITTIHG 591
           YL  C IDN   IWD  +  +++ T+ G
Sbjct: 143 YLASCSIDNTVIIWDAQAFPHSVATLKG 170


>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
          Length = 1047

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 508 YLR*CHIDNVTGIWDFTSXXNTITTIHG 591
           YL  C IDN   IWD  +  +++ T+ G
Sbjct: 143 YLASCSIDNTVIIWDAQAFPHSVATLKG 170


>AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 508 YLR*CHIDNVTGIWDFTSXXNTITTIHG 591
           YL  C IDN   IWD  +  +++ T+ G
Sbjct: 143 YLASCSIDNTVIIWDAQAFPHSVATLKG 170


>AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA
           protein.
          Length = 1047

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 508 YLR*CHIDNVTGIWDFTSXXNTITTIHG 591
           YL  C IDN   IWD  +  +++ T+ G
Sbjct: 143 YLASCSIDNTVIIWDAQAFPHSVATLKG 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,301,186
Number of Sequences: 53049
Number of extensions: 314285
Number of successful extensions: 414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)