Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120891.seq
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 110  LEGQE*GDIENDVSSLPAKGY*RKTFSSPE 21
            L+G + GD END  S P +   RKT  + E
Sbjct: 1393 LQGIDDGDYENDSGSGPDRIGRRKTIHNLE 1422


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 110  LEGQE*GDIENDVSSLPAKGY*RKTFSSPE 21
            L+G + GD END  S P +   RKT  + E
Sbjct: 1393 LQGIDDGDYENDSGSGPDRIGRRKTIHNLE 1422


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 110  LEGQE*GDIENDVSSLPAKGY*RKTFSSPE 21
            L+G + GD END  S P +   RKT  + E
Sbjct: 1393 LQGIDDGDYENDSGSGPDRIGRRKTIHNLE 1422


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 110  LEGQE*GDIENDVSSLPAKGY*RKTFSSPE 21
            L+G + GD END  S P +   RKT  + E
Sbjct: 1393 LQGIDDGDYENDSGSGPDRIGRRKTIHNLE 1422


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 157 LKFWMPTC*LIIWYDHWRVKSKEILRMMFHHYLQKGIKEKPSPLQKHTW 11
           L F+   C L   Y +W+  S      + + Y Q   ++K S   + TW
Sbjct: 10  LFFFSFCCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTW 58


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 118 YDHWRVKSKEILRMMFHHYLQKGIKEK 38
           Y  W  KSK++   + H Y +  I  K
Sbjct: 150 YSTWSKKSKQVEYFLIHWYPRMLISTK 176


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 118 YDHWRVKSKEILRMMFHHYLQKGIKEK 38
           Y  W  KSK++   + H Y +  I  K
Sbjct: 150 YSTWSKKSKQVEYFLIHWYPRMLISTK 176


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 106 RVKSKEILRMMFH 68
           R+KS+E L M FH
Sbjct: 557 RIKSREKLTMKFH 569


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 540 CDIFVQFLKTFHGLECFGCLLSFN 469
           CD+     + F  +   GCL+ FN
Sbjct: 524 CDVCDSVNRIFGFIIIIGCLIQFN 547


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,391
Number of Sequences: 336
Number of extensions: 2561
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)