Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120891.seq
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC049205-1|AAH49205.1| 432|Homo sapiens CDT1 protein protein. 96 1e-19
BC021126-1|AAH21126.1| 408|Homo sapiens CDT1 protein protein. 96 1e-19
BC014202-1|AAH14202.2| 317|Homo sapiens CDT1 protein protein. 96 1e-19
BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and... 96 1e-19
BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein. 96 1e-19
BC008676-1|AAH08676.1| 510|Homo sapiens CDT1 protein protein. 96 1e-19
BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and... 96 1e-19
AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor ... 96 1e-19
AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein. 96 1e-19
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 34 0.50
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 34 0.50
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 34 0.50
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 34 0.50
BC031423-1|AAH31423.1| 313|Homo sapiens UBTF protein protein. 34 0.50
U22816-1|AAC50173.1| 1202|Homo sapiens LAR-interacting protein 1... 30 6.2
U22815-1|AAC50172.1| 1185|Homo sapiens LAR-interacting protein 1... 30 6.2
BC034046-1|AAH34046.1| 1202|Homo sapiens protein tyrosine phosph... 30 6.2
BC067266-1|AAH67266.1| 1461|Homo sapiens periaxin protein. 30 8.2
AL133227-11|CAI40563.1| 338|Homo sapiens engulfment and cell mo... 30 8.2
AL133227-10|CAI40561.1| 720|Homo sapiens engulfment and cell mo... 30 8.2
AL133227-9|CAI40562.1| 718|Homo sapiens engulfment and cell mot... 30 8.2
AK057032-1|BAB71350.1| 338|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF417861-1|AAL38512.1| 720|Homo sapiens PH domain protein CED12... 30 8.2
AF398886-1|AAL14467.1| 720|Homo sapiens ELMO2 protein. 30 8.2
AF321191-1|AAK19279.1| 1461|Homo sapiens L-periaxin protein. 30 8.2
AB058737-1|BAB47463.1| 725|Homo sapiens KIAA1834 protein protein. 30 8.2
AB046840-1|BAB13446.1| 1398|Homo sapiens KIAA1620 protein protein. 30 8.2
>BC049205-1|AAH49205.1| 432|Homo sapiens CDT1 protein protein.
Length = 432
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 172 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 231
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 232 AALPQPPATEKLTTAQEVLARARN 255
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 326 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 362
>BC021126-1|AAH21126.1| 408|Homo sapiens CDT1 protein protein.
Length = 408
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 148 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 207
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 208 AALPQPPATEKLTTAQEVLARARN 231
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 302 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 338
>BC014202-1|AAH14202.2| 317|Homo sapiens CDT1 protein protein.
Length = 317
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 57 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 116
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 117 AALPQPPATEKLTTAQEVLARARN 140
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 211 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 247
>BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 286 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 345
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 346 AALPQPPATEKLTTAQEVLARARN 369
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 440 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 476
>BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein.
Length = 528
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 268 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 327
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 328 AALPQPPATEKLTTAQEVLARARN 351
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 422 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 458
>BC008676-1|AAH08676.1| 510|Homo sapiens CDT1 protein protein.
Length = 510
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 250 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 309
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 310 AALPQPPATEKLTTAQEVLARARN 333
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 404 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 440
>BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 286 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 345
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 346 AALPQPPATEKLTTAQEVLARARN 369
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 440 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 476
>AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor
protein.
Length = 546
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 286 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 345
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 346 AALPQPPATEKLTTAQEVLARARN 369
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 440 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 476
>AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein.
Length = 546
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2
Query: 5 MNPSVLLERRRFFFNTLLQVVMKHHSQYLLTLDPPMVIPDNKLTRWHPEFELEKLPEIES 184
+ S LL+RR+ F L++ V +HH +L +L P MV+P+++LTRWHP F ++++P+IE
Sbjct: 286 LTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEP 345
Query: 185 AKLPELPNVEKMSTAQDVLAKARD 256
A LP+ P EK++TAQ+VLA+AR+
Sbjct: 346 AALPQPPATEKLTTAQEVLARARN 369
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 510 RSSETEQKYHIYSRLPDLARTLRNIFVTERKNVLGIE 620
R E EQ+ RLP+LAR LR++FV+ERK L +E
Sbjct: 440 RCPEQEQRLQRLERLPELARVLRSVFVSERKPALSME 476
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 KLTRWHPEFELEKLPEIESAKLPELPNVEKMSTAQDVLAKARDYSNVILKWRE 286
K + HPE L +I S K ELP +KM QD + +++ + ++RE
Sbjct: 129 KYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRE 181
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 KLTRWHPEFELEKLPEIESAKLPELPNVEKMSTAQDVLAKARDYSNVILKWRE 286
K + HPE L +I S K ELP +KM QD + +++ + ++RE
Sbjct: 129 KYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRE 181
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 KLTRWHPEFELEKLPEIESAKLPELPNVEKMSTAQDVLAKARDYSNVILKWRE 286
K + HPE L +I S K ELP +KM QD + +++ + ++RE
Sbjct: 129 KYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRE 181
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 KLTRWHPEFELEKLPEIESAKLPELPNVEKMSTAQDVLAKARDYSNVILKWRE 286
K + HPE L +I S K ELP +KM QD + +++ + ++RE
Sbjct: 129 KYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRE 181
>BC031423-1|AAH31423.1| 313|Homo sapiens UBTF protein protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 KLTRWHPEFELEKLPEIESAKLPELPNVEKMSTAQDVLAKARDYSNVILKWRE 286
K + HPE L +I S K ELP +KM QD + +++ + ++RE
Sbjct: 129 KYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRE 181
>U22816-1|AAC50173.1| 1202|Homo sapiens LAR-interacting protein 1b
protein.
Length = 1202
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 436 LRNLPTALLEKVKAKQAAKALEAMKGLQKLNKNITFTVDFQISPEH*ETFLSLKERMS 609
LR + L EK + Q A+ E M ++ NK ++ TVD +S + L LKERM+
Sbjct: 416 LRQMEAQLEEKNQELQRARQREKMN--EEHNKRLSDTVDKLLSESNERLQLHLKERMA 471
>U22815-1|AAC50172.1| 1185|Homo sapiens LAR-interacting protein 1a
protein.
Length = 1185
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 436 LRNLPTALLEKVKAKQAAKALEAMKGLQKLNKNITFTVDFQISPEH*ETFLSLKERMS 609
LR + L EK + Q A+ E M ++ NK ++ TVD +S + L LKERM+
Sbjct: 416 LRQMEAQLEEKNQELQRARQREKMN--EEHNKRLSDTVDKLLSESNERLQLHLKERMA 471
>BC034046-1|AAH34046.1| 1202|Homo sapiens protein tyrosine
phosphatase, receptor type, f polypeptide (PTPRF),
interacting protein.
Length = 1202
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 436 LRNLPTALLEKVKAKQAAKALEAMKGLQKLNKNITFTVDFQISPEH*ETFLSLKERMS 609
LR + L EK + Q A+ E M ++ NK ++ TVD +S + L LKERM+
Sbjct: 416 LRQMEAQLEEKNQELQRARQREKMN--EEHNKRLSDTVDKLLSESNERLQLHLKERMA 471
>BC067266-1|AAH67266.1| 1461|Homo sapiens periaxin protein.
Length = 1461
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 104 PPMVIPDNKLTRWHPEFELEKLPEIESAKLPEL 202
P M +PD L PE +L K+PE++ K+PE+
Sbjct: 645 PEMAVPDVHL----PEVQLPKVPEMKLPKMPEM 673
>AL133227-11|CAI40563.1| 338|Homo sapiens engulfment and cell
motility 2 protein.
Length = 338
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 88 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 120
>AL133227-10|CAI40561.1| 720|Homo sapiens engulfment and cell
motility 2 protein.
Length = 720
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 88 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 120
>AL133227-9|CAI40562.1| 718|Homo sapiens engulfment and cell
motility 2 protein.
Length = 718
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 88 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 120
>AK057032-1|BAB71350.1| 338|Homo sapiens protein ( Homo sapiens
cDNA FLJ32470 fis, clone SKNMC2000305. ).
Length = 338
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 88 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 120
>AF417861-1|AAL38512.1| 720|Homo sapiens PH domain protein CED12A
protein.
Length = 720
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 88 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 120
>AF398886-1|AAL14467.1| 720|Homo sapiens ELMO2 protein.
Length = 720
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 88 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 120
>AF321191-1|AAK19279.1| 1461|Homo sapiens L-periaxin protein.
Length = 1461
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 104 PPMVIPDNKLTRWHPEFELEKLPEIESAKLPEL 202
P M +PD L PE +L K+PE++ K+PE+
Sbjct: 645 PEMAVPDVHL----PEVQLPKVPEMKLPKMPEM 673
>AB058737-1|BAB47463.1| 725|Homo sapiens KIAA1834 protein protein.
Length = 725
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 457 LLEKVKAKQAAKALEAMKGLQKLNKNITFTVDF 555
L+E+ ++ L+AMK L KL+ ++TF +F
Sbjct: 93 LMERTQSSNMETRLDAMKELAKLSADVTFATEF 125
>AB046840-1|BAB13446.1| 1398|Homo sapiens KIAA1620 protein protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 104 PPMVIPDNKLTRWHPEFELEKLPEIESAKLPEL 202
P M +PD L PE +L K+PE++ K+PE+
Sbjct: 647 PEMAVPDVHL----PEVQLPKVPEMKLPKMPEM 675
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,987,931
Number of Sequences: 237096
Number of extensions: 1524789
Number of successful extensions: 3354
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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