Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120889.seq
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 161 5e-40
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 159 2e-39
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 158 3e-39
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 115 2e-26
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 89 2e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 89 2e-18
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 89 2e-18
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 87 7e-18
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 87 1e-17
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 87 1e-17
03_01_0034 + 318432-318825,318902-319851 86 2e-17
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 84 7e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 57 9e-09
10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018 31 0.91
11_01_0569 + 4515722-4515733,4517579-4517701,4517812-4517934,452... 28 4.8
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 161 bits (390), Expect = 5e-40
Identities = 76/115 (66%), Positives = 82/115 (71%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G+Q+GNACWEL CLEHGI A G + +T GAGKHV R VFVDLEP
Sbjct: 13 GIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DEVRTG YRQLFH EQ GKE A N +ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 73 TVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG + LL+ER VDYGKK
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKK 164
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 159 bits (385), Expect = 2e-39
Identities = 75/115 (65%), Positives = 82/115 (71%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G+Q+GNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 13 GIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DEVRTG YRQLFH EQ +GKE A N +ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 73 TVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG + LL+ER VDYGKK
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKK 164
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 158 bits (384), Expect = 3e-39
Identities = 72/115 (62%), Positives = 82/115 (71%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G+Q+GNACWEL CLEHGI T +T GAGKHV R +FVDLEP
Sbjct: 13 GIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DEVRTG+YRQLFH EQ +GKE A N +ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 73 TVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG + LL+ER VDYGKK
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKK 164
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 115 bits (277), Expect = 2e-26
Identities = 52/88 (59%), Positives = 63/88 (71%)
Frame = +1
Query: 214 TRPSGVETILSTLSQRDGAGKHVXRXVFVDLEPTVVDEVRTGTYRQLFHXEQXXTGKEXA 393
T P +T +GKHV R +FVDLEPTV+DEV+TG YRQLFH EQ + KE A
Sbjct: 100 TTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDA 159
Query: 394 GNKYARGHYTIGKEIVDLVLDRIRKLAD 477
N +ARGHYT+G+E+VDL LDR+RKLAD
Sbjct: 160 ANNFARGHYTVGREVVDLCLDRLRKLAD 187
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG + LL+ER VDYG+K
Sbjct: 189 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRK 224
Score = 41.9 bits (94), Expect = 4e-04
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGI 186
G+Q+GN+CWEL CLEHGI
Sbjct: 13 GIQVGNSCWELYCLEHGI 30
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 89.4 bits (212), Expect = 2e-18
Identities = 47/115 (40%), Positives = 64/115 (55%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG+ WE+ C EHGI T +E + + G+ V R V +DLEP
Sbjct: 193 GNQIGSKFWEVVCDEHGIDPT-GRYAGTSDLQLERV-NVYYNEASCGRFVPRAVLMDLEP 250
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VRTG Y Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 251 GTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 305
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF + GGGTG + LL+ + +Y
Sbjct: 307 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 339
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 89.0 bits (211), Expect = 2e-18
Identities = 46/115 (40%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ C EHG+ T P +E I ++ G G+HV R V +DLEP
Sbjct: 13 GNQIGAKFWEVICGEHGVDPT-GTYTGTSPQQLERINVYFNEASG-GRHVPRAVLMDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D +R+G +F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 89.0 bits (211), Expect = 2e-18
Identities = 47/115 (40%), Positives = 64/115 (55%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG+ WE+ C EHGI T +E + + G+ V R V +DLEP
Sbjct: 13 GNQIGSKFWEVVCDEHGIDPT-GRYVGTSDLQLERV-NVYYNEASCGRFVPRAVLMDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VRTG Y Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF + GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 87.4 bits (207), Expect = 7e-18
Identities = 46/115 (40%), Positives = 67/115 (58%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ C EHG+ A + +E I ++ G G++V R V +DLEP
Sbjct: 13 GNQIGAKFWEVICDEHGVDATGRYAGDSDLQ-LERINVYYNEASG-GRYVPRAVLMDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF + GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 87.0 bits (206), Expect = 1e-17
Identities = 47/115 (40%), Positives = 66/115 (57%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ C EHGI + +E I ++ G G++V R V +DLEP
Sbjct: 13 GNQIGAKFWEVICDEHGIDHTGKYSGDSDLQ-LERINVYYNEASG-GRYVPRAVLMDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G Y Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF + GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 86.6 bits (205), Expect = 1e-17
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETI----LSTLSQRDGAGKHVXRXVFV 300
G QIG WE+ C EHGI P R +G + ++ G+ V R V +
Sbjct: 13 GNQIGAKFWEVVCDEHGID------PTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLM 66
Query: 301 DLEPTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
DLEP +D VRTG Y Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 67 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 85.8 bits (203), Expect = 2e-17
Identities = 45/115 (39%), Positives = 63/115 (54%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ C EHGI A + +E + + G+ V R V +DLEP
Sbjct: 13 GNQIGAKFWEVVCAEHGIDATGRYDGDSDLQ-LERV-NVYYNEASCGRFVPRAVLMDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G Y +F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAE 125
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF + GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 84.2 bits (199), Expect = 7e-17
Identities = 46/115 (40%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ C EHGI + +E I ++ G G+ V R V +DLEP
Sbjct: 13 GNQIGAKFWEVICDEHGIDHTGKYSGDSDLQ-LERINVYYNEASG-GRFVPRAVLMDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF + GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 57.2 bits (132), Expect = 9e-09
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG W+ CLEHGI G + Q D ++ R + VDLEP
Sbjct: 14 GNQIGMEFWKQLCLEHGI-GKDGLLEDFATQGGDRKDVFFYQADDQ-HYIPRALLVDLEP 71
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKE--XAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
V++ ++ YR L++ E + AGN +A G++ G+++VD ++D I + AD
Sbjct: 72 RVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMIDREAD 127
>10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018
Length = 1040
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 108 MHSRILDLEFFSMLKCRMEL*SVVVQRDRLSGLVPN 1
M SR+ D EF ++L L V +Q +RL G +PN
Sbjct: 333 MASRVQDWEFITLLTNCTSLRGVTLQNNRLGGALPN 368
>11_01_0569 +
4515722-4515733,4517579-4517701,4517812-4517934,
4520422-4520520,4520649-4520705,4521421-4521533,
4521633-4521810,4523684-4523764,4523837-4523920,
4525429-4525437
Length = 292
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -3
Query: 201 GHQGWDAVLQAVKLPAGITDLDSXLGPTCTEMHS 100
G Q WDA L L A TDL LGPT HS
Sbjct: 8 GSQVWDAGLTVEALVA--TDLVKELGPTLKRAHS 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,476,580
Number of Sequences: 37544
Number of extensions: 339624
Number of successful extensions: 811
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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