Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120889.seq
(590 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 167 6e-42
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 167 8e-42
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 166 1e-41
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 163 7e-41
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 4e-39
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 1e-38
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 120 1e-27
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 95 5e-20
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 8e-19
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 89 3e-18
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 85 5e-17
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 84 7e-17
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 79 3e-15
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-14
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 61 6e-10
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 54 9e-08
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 34 0.076
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.40
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 28 6.6
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 167 bits (406), Expect = 6e-42
Identities = 82/115 (71%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 77 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 136
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYTIGKEIVDLVLDRIRKLAD
Sbjct: 137 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Score = 165 bits (402), Expect = 2e-41
Identities = 79/115 (68%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 598 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 657
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE++DLVLDRIRKLAD
Sbjct: 658 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Score = 71.3 bits (167), Expect = 5e-13
Identities = 35/62 (56%), Positives = 37/62 (59%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 525 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 584
Query: 313 TV 318
TV
Sbjct: 585 TV 586
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 192 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 228
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 713 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 749
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 192 PDGXMXTDKTIGGGDDSFNTF 254
PDG M +DKTIGGGDDSFNTF
Sbjct: 544 PDGQMPSDKTIGGGDDSFNTF 564
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 167 bits (405), Expect = 8e-42
Identities = 81/115 (70%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKEIVDLVLDRIRKLAD
Sbjct: 73 TVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Score = 167 bits (405), Expect = 8e-42
Identities = 81/115 (70%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 446 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 505
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKEIVDLVLDRIRKLAD
Sbjct: 506 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 164
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 561 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 597
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 166 bits (404), Expect = 1e-41
Identities = 80/115 (69%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 12 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 71
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKEI+DLVLDRIRKLAD
Sbjct: 72 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 127 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 163
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 163 bits (397), Expect = 7e-41
Identities = 79/115 (68%), Positives = 83/115 (72%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQ+GNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 13 GVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYTIGKEI+DLVLDR RKLAD
Sbjct: 73 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKK 164
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 162 bits (394), Expect = 2e-40
Identities = 77/115 (66%), Positives = 83/115 (72%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQ+GNACWEL CLEHGI G + +T GAGKHV R VF DLEP
Sbjct: 817 GVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFADLEP 876
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE++DLVLDRIRKLAD
Sbjct: 877 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLAD 931
Score = 161 bits (392), Expect = 3e-40
Identities = 76/115 (66%), Positives = 83/115 (72%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 384 GVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKHVPRAVFVDLEP 443
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE +D+VLDR+RKLAD
Sbjct: 444 TVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 932 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 968
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 500 CTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 535
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 158 bits (383), Expect = 4e-39
Identities = 74/115 (64%), Positives = 82/115 (71%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQ+GNACWEL CLEHGI G + +T G+GKHV R VF DLEP
Sbjct: 13 GVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGKHVPRAVFCDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE++D VLDR+RKLAD
Sbjct: 73 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLAD 127
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 129 CTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 164
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 156 bits (378), Expect = 1e-38
Identities = 73/115 (63%), Positives = 82/115 (71%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQ+GNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 431 GVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 490
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+V+DE+RTGTYRQLFH EQ TGKE A N YARGHYT+GK+ +D VLDRIRKLAD
Sbjct: 491 SVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Score = 152 bits (368), Expect = 2e-37
Identities = 70/112 (62%), Positives = 80/112 (71%)
Frame = +1
Query: 142 IGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEPTVV 321
+GNACWEL CLEHGI G + +T GAGKHV R VF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 322 DEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
DEVRTGTYRQLFH EQ TGKE A N YARGHYT+GK+++++VLDR+RKLAD
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLAD 112
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 113 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 149
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QC+GLQGFL+ GGGTG LL+ER VDYGKK
Sbjct: 546 QCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKK 582
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 126 bits (305), Expect = 1e-29
Identities = 58/84 (69%), Positives = 65/84 (77%)
Frame = +1
Query: 226 GVETILSTLSQRDGAGKHVXRXVFVDLEPTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKY 405
G + +T GAGKHV R VFVDLEPTV+DE+RTGTYRQLFH EQ +GKE A N Y
Sbjct: 9 GGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNY 68
Query: 406 ARGHYTIGKEIVDLVLDRIRKLAD 477
ARGHYT+GKE +DL LDRIRKLAD
Sbjct: 69 ARGHYTVGKEHIDLALDRIRKLAD 92
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 93 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 129
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 204 MXTDKTIGGGDDSFNTFSA 260
M +DKTIGGGDDSFNTF A
Sbjct: 1 MPSDKTIGGGDDSFNTFFA 19
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 120 bits (288), Expect = 1e-27
Identities = 65/115 (56%), Positives = 69/115 (60%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T GAGKHV R VFVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGKHVPRAVFVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVV EQ TGKE A N YARGHYTIGK+ VD VLDR+RKLAD
Sbjct: 73 TVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLAD 117
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QC+GLQGF I GGGTG LLMER VDYGKK
Sbjct: 118 QCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKK 154
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 109 bits (261), Expect = 2e-24
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +1
Query: 268 AGKHVXRXVFVDLEPTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDL 447
AGK+V R V VDLEPTV+DEVRTG YR L+H EQ +GKE A N YARGHYTIGKE+V++
Sbjct: 969 AGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEV 1028
Query: 448 VLDRIRKLAD 477
V+D+IRK+ D
Sbjct: 1029 VMDKIRKMTD 1038
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QC+GLQGFLI GGGTG L+ E VDYGKK
Sbjct: 1039 QCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKK 1075
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = +1
Query: 316 VVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+ DEVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE++DLVLDRIRKLAD
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 64
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 65 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 101
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 94.7 bits (225), Expect = 5e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +1
Query: 325 EVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
EVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE++DLVLDRIRKLAD
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 52
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 53 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 89
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 90.6 bits (215), Expect = 8e-19
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +1
Query: 325 EVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKL 471
EVRTGTYRQLFH EQ TGKE A N YARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +1
Query: 325 EVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
E+RTGTYRQLFH EQ +GKE A N YARGHYT+GKE +DL LDRIRKLAD
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 52
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 53 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 89
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/115 (41%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ EHGI + +E I ++ G GK+V R V VDLEP
Sbjct: 226 GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ-LERINVYYNEATG-GKYVPRAVLVDLEP 283
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + Q+F + G+ AGN +A+GHYT G E+VD VLD +RK A+
Sbjct: 284 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 338
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 340 CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 372
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 84.2 bits (199), Expect = 7e-17
Identities = 47/115 (40%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ EHGI + +E I ++ G GK+V R + VDLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ-LERINVYYNEATG-GKYVPRAILVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + Q+F + G+ AGN +A+GHYT G E+VD VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 125
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/115 (40%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ EHGI + +E I ++ G GK+V R V +DLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ-LERINVYYNEATG-GKYVPRSVLIDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + Q+F + G+ AGN +A+GHYT G E++D VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAE 125
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C +QGF ++ GGGTG + LL+ + +Y
Sbjct: 127 CDCIQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 325 EVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLADPVYR 489
EVR GTYR LFH +Q TGKE A N YARGHYT+GKE +DL L++IRKL Y+
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKLVGINYQ 56
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +1
Query: 271 GKHVXRXVFVDLEPTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLV 450
GK+V R V VDLEP +D VR+G + Q+F + G+ AGN +A+GHYT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 451 LDRIRKLAD 477
LD +RK A+
Sbjct: 62 LDVVRKEAE 70
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + +T G GKHV R VFVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGKHVPRAVFVDLEP 72
Query: 313 TVVDEVR 333
+VV ++
Sbjct: 73 SVVGRMK 79
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +1
Query: 271 GKHVXRXVFVDLEPTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLV 450
G++V R + VDLEP +D VR G +F + + A N +A+GHY+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 451 LDRIRKLAD 477
D +RK A+
Sbjct: 73 FDVLRKEAE 81
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/45 (57%), Positives = 28/45 (62%)
Frame = +2
Query: 455 TESXSXLTQCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
T S QCTGLQGFL+ GGGTG LLMER VDYGK+
Sbjct: 251 TASGKHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKR 295
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKH 279
GVQIGNACWEL CLEHGI + ST +GKH
Sbjct: 208 GVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGKH 256
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/37 (70%), Positives = 26/37 (70%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
QCTGLQGFLI GGGTG LLMER VDYGKK
Sbjct: 3 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 39
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ EHGI + +E I ++ G GK+V R + VDLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ-LERINVYYNEATG-GKYVPRAILVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXE 366
+D VR+G + Q+F +
Sbjct: 71 GTMDSVRSGPFGQIFRPD 88
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 391 AGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
A N +A+G YT G E++D +D IRKLA+
Sbjct: 5 AANNWAKGFYTEGAELMDSGMDCIRKLAE 33
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C +QGF I+ GGGTG + LL+ + +Y
Sbjct: 35 CDTVQGFQIAHSLGGGTGSGLGSLLLSKIREEY 67
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +1
Query: 286 RXVFVDLEPTVVDEV-----RTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLV 450
R V +D+E V+ + ++GT+R + Q + K +GN +A G G + +D V
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKV 124
Query: 451 LDRIRK 468
LD +++
Sbjct: 125 LDLVQR 130
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 286 RXVFVDLEPTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKY 405
R V +D+E VV+ + G +F +Q T GN +
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,266,801
Number of Sequences: 59808
Number of extensions: 357280
Number of successful extensions: 790
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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