Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120889.seq
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 158 3e-39
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 158 3e-39
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 158 3e-39
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 158 3e-39
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 152 2e-37
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 152 2e-37
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 152 2e-37
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 150 6e-37
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 150 6e-37
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 148 3e-36
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 146 1e-35
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 146 1e-35
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 145 2e-35
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 142 1e-34
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 133 8e-32
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 120 6e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 86 2e-17
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 85 5e-17
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 85 5e-17
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 85 5e-17
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 84 6e-17
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 76 2e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 76 2e-14
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 29 2.5
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 29 2.5
Z83233-3|CAB05762.1| 83|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 29 3.3
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 27 10.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 158 bits (383), Expect = 3e-39
Identities = 74/115 (64%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + ST G+G+HV R V VDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DE+RTGTYR LFH EQ TGKE A N YARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 73 TVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 127
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG LLMER VDYGKK
Sbjct: 129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 158 bits (383), Expect = 3e-39
Identities = 74/115 (64%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + ST G+G+HV R V VDLEP
Sbjct: 12 GVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEP 71
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DE+RTGTYR LFH EQ TGKE A N YARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 72 TVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 126
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG LLMER VDYGKK
Sbjct: 128 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 163
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 158 bits (383), Expect = 3e-39
Identities = 74/115 (64%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + ST G+G+HV R V VDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DE+RTGTYR LFH EQ TGKE A N YARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 73 TVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 127
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG LLMER VDYGKK
Sbjct: 129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 158 bits (383), Expect = 3e-39
Identities = 74/115 (64%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI G + ST G+G+HV R V VDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEP 72
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TV+DE+RTGTYR LFH EQ TGKE A N YARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 73 TVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 127
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
CTGLQGFL+ GGGTG LLMER VDYGKK
Sbjct: 129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 152 bits (369), Expect = 2e-37
Identities = 71/115 (61%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI Q+ G +T G+G++V R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGTMPTQSTNEGES--FTTFFSDTGSGRYVPRSIFVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTGTY++LFH EQ TGKE A N YARGHYT+GKE++D VLDRIR+LAD
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C+GLQGF + GGGTG LLMER VDYGKK
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 152 bits (369), Expect = 2e-37
Identities = 71/115 (61%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI + P G L T G G+HV R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGI---LPDGTSMEPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEP 69
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTG Y++LFH EQ TGKE A N YARGHYT+GKEI+D LDRIR+LA+
Sbjct: 70 TVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLAN 124
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C GLQGF + GGGTG +LMER +YGKK
Sbjct: 126 CEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKK 161
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 152 bits (369), Expect = 2e-37
Identities = 71/115 (61%), Positives = 84/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI Q+ G +T G+G++V R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGTMPTQSTNEGES--FTTFFSDTGSGRYVPRSIFVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTGTY++LFH EQ TGKE A N YARGHYT+GKE++D VLDRIR+LAD
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C+GLQGF + GGGTG LLMER VDYGKK
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 150 bits (364), Expect = 6e-37
Identities = 71/115 (61%), Positives = 85/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI P + + E+ + S G G++V R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQP-DGTMPSDQQADGESFTTFFSDT-GNGRYVPRSIFVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTGTY++LFH EQ TGKE A N YARGHYT+GKE++D VLDRIR+LAD
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C+GLQGF + GGGTG LLMER VDYGKK
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 150 bits (364), Expect = 6e-37
Identities = 71/115 (61%), Positives = 85/115 (73%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI P + + E+ + S G G++V R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQP-DGTMPSDQQADGESFTTFFSDT-GNGRYVPRSIFVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTGTY++LFH EQ TGKE A N YARGHYT+GKE++D VLDRIR+LAD
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C+GLQGF + GGGTG LLMER VDYGKK
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 148 bits (359), Expect = 3e-36
Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVET-ILSTLSQRDGAGKHVXRXVFVDLE 309
GVQIGNACWEL CLEHGI P GVE +T +GKHV R +FVDLE
Sbjct: 13 GVQIGNACWELYCLEHGITP-DGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLE 71
Query: 310 PTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
PTV+DEVRTGTY +LFH EQ +GKE A N YARGHYTIGKE++D+V+DR+R+L +
Sbjct: 72 PTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTE 127
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 479 QCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
+C LQGFLI GGGTG L+MER +DYGKK
Sbjct: 128 RCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKK 164
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 146 bits (353), Expect = 1e-35
Identities = 68/115 (59%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI + + G +T G G++V R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGS--FTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTG Y++LFH EQ TGKE A N YARGHYT+GKE++D LDRIR+LAD
Sbjct: 71 TVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLAD 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C+GLQGF + GGGTG LLMER VDYGKK
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 146 bits (353), Expect = 1e-35
Identities = 68/115 (59%), Positives = 81/115 (70%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQIGNACWEL CLEHGI + + G +T G G++V R +FVDLEP
Sbjct: 13 GVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGS--FTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TVVDE+RTG Y++LFH EQ TGKE A N YARGHYT+GKE++D LDRIR+LAD
Sbjct: 71 TVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLAD 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C+GLQGF + GGGTG LLMER VDYGKK
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKK 162
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 145 bits (352), Expect = 2e-35
Identities = 71/116 (61%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGI-PALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLE 309
GVQIGNACWEL CLEHGI P T ETI + ++ G GKHV R +FVDLE
Sbjct: 19 GVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAG-GKHVPRCLFVDLE 77
Query: 310 PTVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
PTVVDEVRTGTYR LFH EQ +GKE A N YARG YTIG+E++D+V+DR+++LA+
Sbjct: 78 PTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAE 133
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C GLQGF+I GGGTG LLMER +YGKK
Sbjct: 135 CNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKK 170
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 142 bits (345), Expect = 1e-34
Identities = 65/115 (56%), Positives = 79/115 (68%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
GVQ+GNACWEL CLEHGI + + +T AGKHV R + VDLEP
Sbjct: 18 GVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEP 77
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
T +DE+RTGTY+ LFH EQ TGKE A N YARGHYTIGKEI+D+V+DR+R+L +
Sbjct: 78 TPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVE 132
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C GLQGFL+ GGGTG LLMER VDYGKK
Sbjct: 134 CRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKK 169
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 133 bits (322), Expect = 8e-32
Identities = 60/112 (53%), Positives = 77/112 (68%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIGNACWEL C+EHG+ + + +++ + S+ GKHV R ++VDLEP
Sbjct: 17 GAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMN-GKHVPRAIYVDLEP 75
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRK 468
TV+DE+R G Y LFH +Q GKE A N YARGHYTIGKE++D+VLDRIRK
Sbjct: 76 TVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRK 127
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C GLQGFL+ GGGTG LLMER V++GKK
Sbjct: 132 CEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKK 167
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 120 bits (290), Expect = 6e-28
Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = +1
Query: 163 LXCLEHGI-PALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEPTVVDEVRTG 339
+ CLEHGI P T ETI + ++ G GKHV R +FVDLEPTVVDEVRTG
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAG-GKHVPRCLFVDLEPTVVDEVRTG 59
Query: 340 TYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
TYR LFH EQ +GKE A N YARG YTIG+E++D+V+DR+++LA+
Sbjct: 60 TYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAE 105
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDYGKK 589
C GLQGF+I GGGTG LLMER +YGKK
Sbjct: 107 CNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKK 142
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 85.8 bits (203), Expect = 2e-17
Identities = 50/115 (43%), Positives = 67/115 (58%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG+ WE+ EHGI +T +E I ++ + GK+V R V VDLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIQPDGTFKGETDLQ-LERIDVYYNEANN-GKYVPRAVLVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + QLF + G+ AGN +A+GHYT G E+VD VLD IRK A+
Sbjct: 71 GTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAE 125
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 85.4 bits (202), Expect = 3e-17
Identities = 49/115 (42%), Positives = 67/115 (58%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ EHGI ++ +E I ++ +G GK+V R V VDLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIQPDGTYKGESDLQ-LERINVYYNEANG-GKYVPRAVLVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + QLF + G+ AGN +A+GHYT G E+VD VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 84.6 bits (200), Expect = 5e-17
Identities = 49/115 (42%), Positives = 64/115 (55%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE+ EHGI A + +E I ++ G GK+V R VDLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIDPTGAYNGDSDLQ-LERINVYYNEASG-GKYVPRACLVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR G + QLF + G+ AGN +A+GHYT G E+VD VLD +RK A+
Sbjct: 71 GTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 127 CDCLQGFQMTHSLGGGTGSGMGTLLISKIREEY 159
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/115 (41%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG+ WE+ EHGI + +E I + G+ K+V R V VDLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIDPSGQYVGDSDLQ-LERI-NVYYNEAGSNKYVPRAVLVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + QLF + G+ AGN +A+GHYT G E+VD VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 476 TQCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
T C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 127 TDC--LQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/115 (41%), Positives = 65/115 (56%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG+ WE+ EHGI + +E I + G+ K+V R V VDLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIDPSGQYVGDSDLQ-LERI-NVYYNEAGSNKYVPRAVLVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + QLF + G+ AGN +A+GHYT G E+VD VLD +RK A+
Sbjct: 71 GTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 476 TQCTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
T C LQGF ++ GGGTG + LL+ + +Y
Sbjct: 127 TDC--LQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 84.2 bits (199), Expect = 6e-17
Identities = 49/115 (42%), Positives = 67/115 (58%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG+ WE+ EHGI ++ +E I ++ + GK+V R V VDLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIQPDGTFKGESDLQ-LERIDVYYNEANN-GKYVPRAVLVDLEP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLAD 477
+D VR+G + QLF + G+ AGN +A+GHYT G E+VD VLD IRK A+
Sbjct: 71 GTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAE 125
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 482 CTGLQGFLISTPXGGGTGLWVHLLLMERFXVDY 580
C LQGF ++ GGGTG + LL+ + ++
Sbjct: 127 CDCLQGFQLTHSLGGGTGSGMGTLLISKIREEF 159
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 75.8 bits (178), Expect = 2e-14
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE EHG+ S +E I S + +G K+V R + VDL+P
Sbjct: 13 GNQIGAKFWEYISEEHGLQT-DGTYKGDNGSQLERITSYYKEMEGR-KYVPRAILVDLDP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLADPVYRS 492
++ VR+ Y +LF E +G+ AGN ++RG+Y G EIVD VL IR+ A+
Sbjct: 71 ESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSL 130
Query: 493 ARIPDLHSXXWRYXA-LGSLVI 555
+HS + LGSL+I
Sbjct: 131 EGFQLIHSLGGGTGSGLGSLLI 152
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 75.8 bits (178), Expect = 2e-14
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +1
Query: 133 GVQIGNACWELXCLEHGIPALMAXXPQTRPSGVETILSTLSQRDGAGKHVXRXVFVDLEP 312
G QIG WE EHG+ S +E I S + +G K+V R + VDL+P
Sbjct: 13 GNQIGAKFWEYISEEHGLQT-DGTYKGDNGSQLERITSYYKEMEGR-KYVPRAILVDLDP 70
Query: 313 TVVDEVRTGTYRQLFHXEQXXTGKEXAGNKYARGHYTIGKEIVDLVLDRIRKLADPVYRS 492
++ VR+ Y +LF E +G+ AGN ++RG+Y G EIVD VL IR+ A+
Sbjct: 71 ESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSL 130
Query: 493 ARIPDLHSXXWRYXA-LGSLVI 555
+HS + LGSL+I
Sbjct: 131 EGFQLIHSLGGGTGSGLGSLLI 152
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 107 CTHAFWIWSFFLCLNVEWNYNQSSFS 30
C H W+ S C+NV WN Q +F+
Sbjct: 848 CFH--WVQSNSFCINVSWNVGQPNFT 871
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 107 CTHAFWIWSFFLCLNVEWNYNQSSFS 30
C H W+ S C+NV WN Q +F+
Sbjct: 889 CFH--WVQSNSFCINVSWNVGQPNFT 912
>Z83233-3|CAB05762.1| 83|Caenorhabditis elegans Hypothetical
protein K06B4.3 protein.
Length = 83
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -2
Query: 457 CPKPNLQFPFQWCSDHGHICCPHXPXXXXVVLXETTVCMCQC 332
C KP++ + C D + CC +++ VC C C
Sbjct: 15 CGKPSIAHHYYRCGDDTNECCIALEIWVYILMGVFIVCCCCC 56
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 218 LVCGHXAIRAGMPCSRQXSSQQALPIWTPGLGQRVQRCTHAFWIWSFFLCLNVEWNYNQS 39
L G I M S QA +W G G++++ T F + +L WNY+ S
Sbjct: 10 LPLGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGS 69
Query: 38 S 36
S
Sbjct: 70 S 70
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 131 GLGQRVQRCTHAFWIWSFF 75
GL + +C H FW WS F
Sbjct: 1152 GLANFIVKCVHLFWKWSLF 1170
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 387 FLXXXXLFXMKQLSVCASADLINNSRFKIDEDXTXYV 277
FL F K ++VC S LI R+ DED + V
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDEDISKTV 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,248,346
Number of Sequences: 27780
Number of extensions: 263413
Number of successful extensions: 628
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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