Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120888.seq
         (640 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06694 Cluster: Uncharacterized 26.9 kDa protein in GP4...   183   4e-45
UniRef50_O10334 Cluster: Uncharacterized 24.9 kDa protein; n=9; ...   157   2e-37
UniRef50_Q0IL27 Cluster: ORF92; n=4; root|Rep: ORF92 - Leucania ...   149   4e-35
UniRef50_Q80LN2 Cluster: Putative uncharacterized protein; n=1; ...   140   2e-32
UniRef50_Q461Z2 Cluster: Orf74; n=3; Nucleopolyhedrovirus|Rep: O...   140   3e-32
UniRef50_Q6QXL4 Cluster: ORF94; n=9; Granulovirus|Rep: ORF94 - A...   132   7e-30
UniRef50_Q0N427 Cluster: Ac81-like protein; n=4; Nucleopolyhedro...   129   5e-29
UniRef50_Q8QLD1 Cluster: Putative uncharacterized protein; n=1; ...   112   6e-24
UniRef50_Q6JKB2 Cluster: Putative uncharacterized protein; n=3; ...    82   1e-14
UniRef50_Q8JKS8 Cluster: Orf33; n=1; Heliothis zea virus 1|Rep: ...    33   7.7  

>UniRef50_Q06694 Cluster: Uncharacterized 26.9 kDa protein in
           GP41-PNK intergenic region; n=11;
           Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa
           protein in GP41-PNK intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 233

 Score =  183 bits (445), Expect = 4e-45
 Identities = 82/85 (96%), Positives = 84/85 (98%)
 Frame = -1

Query: 508 SKVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCK 329
           SKVKVKKTGASILAHYFAQ+HVS GYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCK
Sbjct: 83  SKVKVKKTGASILAHYFAQIHVSTGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCK 142

Query: 328 KELRDYIKGENSFNVAFKNCESILC 254
           KELRDYIKGENSFNVAF+NCESILC
Sbjct: 143 KELRDYIKGENSFNVAFRNCESILC 167



 Score = 97.1 bits (231), Expect = 3e-19
 Identities = 45/61 (73%), Positives = 48/61 (78%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHKST 75
           RR+SFQTVL+TCA+LLLLFNVEKFSM            LFCHNNYIISNP IEFCNHKST
Sbjct: 168 RRVSFQTVLLTCAILLLLFNVEKFSMINLLIILLILLSLFCHNNYIISNPYIEFCNHKST 227

Query: 74  N 72
           N
Sbjct: 228 N 228



 Score = 41.1 bits (92), Expect = 0.022
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -2

Query: 615 NKIKYDSELLLHYLYDD 565
           NKIKYDSELLLHYLYDD
Sbjct: 48  NKIKYDSELLLHYLYDD 64


>UniRef50_O10334 Cluster: Uncharacterized 24.9 kDa protein; n=9;
           Nucleopolyhedrovirus|Rep: Uncharacterized 24.9 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 218

 Score =  157 bits (382), Expect = 2e-37
 Identities = 70/84 (83%), Positives = 74/84 (88%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKK 326
           KVKVKKTGASILAHYFA V  S GY FEFHPGSQPRTFQT+HTDGLIIKV I+CD CCK 
Sbjct: 70  KVKVKKTGASILAHYFAHVSTSTGYEFEFHPGSQPRTFQTVHTDGLIIKVHIMCDACCKA 129

Query: 325 ELRDYIKGENSFNVAFKNCESILC 254
           ELR YI+GEN FNVAF+NCESILC
Sbjct: 130 ELRRYIEGENGFNVAFRNCESILC 153



 Score = 73.7 bits (173), Expect = 3e-12
 Identities = 34/59 (57%), Positives = 40/59 (67%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHKS 78
           RR+SFQT+L+   +LLLLFNVE FS             LFCHNNYIISNP + FCNHK+
Sbjct: 154 RRVSFQTLLLGSVILLLLFNVENFSALNLLVILLILLALFCHNNYIISNPHVVFCNHKN 212



 Score = 33.9 bits (74), Expect = 3.3
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 615 NKIKYDSELLLHYLYD 568
           NKIKYDSELLL YLY+
Sbjct: 37  NKIKYDSELLLQYLYE 52


>UniRef50_Q0IL27 Cluster: ORF92; n=4; root|Rep: ORF92 - Leucania
           separata nuclear polyhedrosis virus (LsNPV)
          Length = 240

 Score =  149 bits (362), Expect = 4e-35
 Identities = 59/84 (70%), Positives = 79/84 (94%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKK 326
           KV+V+KTG ++LAHY+A++ +S+GY+FEFHPGSQPRTFQT+HTDG+II V ILC+ECC+K
Sbjct: 90  KVRVRKTGGAMLAHYYARIKLSSGYTFEFHPGSQPRTFQTVHTDGIIILVRILCNECCRK 149

Query: 325 ELRDYIKGENSFNVAFKNCESILC 254
           EL+D+++GEN FN+AF+NCESILC
Sbjct: 150 ELKDFVEGENKFNIAFQNCESILC 173



 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 24/58 (41%), Positives = 33/58 (56%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHK 81
           +R S QTVL+T AV+++L NV  FS             L+ +NNY+I +P I  C HK
Sbjct: 174 KRKSMQTVLITIAVIIVLINVGNFSFVHVFFILIIIVLLYINNNYMIRDPKISICKHK 231


>UniRef50_Q80LN2 Cluster: Putative uncharacterized protein; n=1;
           Adoxophyes honmai NPV|Rep: Putative uncharacterized
           protein - Adoxophyes honmai nucleopolyhedrovirus
          Length = 267

 Score =  140 bits (340), Expect = 2e-32
 Identities = 58/90 (64%), Positives = 77/90 (85%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKK 326
           KVKVKK+  +ILAHY+A +++ N YSFEFHPGSQP+TFQT+HT+G +I V++LC+ CC++
Sbjct: 111 KVKVKKSYGAILAHYYAHINLFNNYSFEFHPGSQPKTFQTVHTNGHVIYVMVLCNTCCEE 170

Query: 325 ELRDYIKGENSFNVAFKNCESILCGASVFK 236
           ELR+++ GENSFNVAFKNCESILC    F+
Sbjct: 171 ELRNFVTGENSFNVAFKNCESILCKRKSFQ 200



 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHKST 75
           +R SFQT+++  A+L +  N+ KFS             L+ +NNY+ISNP I +C+H  T
Sbjct: 195 KRKSFQTIIIATALLFIFTNMIKFSWYFIFLVLFLMFLLYVNNNYMISNPQIVYCDHLKT 254


>UniRef50_Q461Z2 Cluster: Orf74; n=3; Nucleopolyhedrovirus|Rep:
           Orf74 - Trichoplusia ni SNPV
          Length = 242

 Score =  140 bits (338), Expect = 3e-32
 Identities = 57/84 (67%), Positives = 71/84 (84%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKK 326
           K +VKKT  ++LAHY+A + +SNGYSFE HPGSQP+TFQ +H+DG +I  L+LCD+CCK 
Sbjct: 63  KTRVKKTYGTMLAHYYAHIDISNGYSFELHPGSQPKTFQIVHSDGSMIMALVLCDDCCKD 122

Query: 325 ELRDYIKGENSFNVAFKNCESILC 254
           ELR +I GEN+FNVAFKNCESILC
Sbjct: 123 ELRSFIDGENNFNVAFKNCESILC 146



 Score = 38.7 bits (86), Expect = 0.12
 Identities = 20/58 (34%), Positives = 33/58 (56%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHK 81
           +R S QTV ++ A+++++ N+  FS             L+ +NNY+IS+P I  C HK
Sbjct: 147 KRKSMQTVFVSLALVVIVANMFTFSWYFIFLVIFIIAILYINNNYMISDPKIIVCPHK 204



 Score = 33.1 bits (72), Expect = 5.8
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -2

Query: 615 NKIKYDSELLLHYLYD 568
           N+IKYD ELL+HYL+D
Sbjct: 33  NRIKYDPELLIHYLFD 48


>UniRef50_Q6QXL4 Cluster: ORF94; n=9; Granulovirus|Rep: ORF94 -
           Agrotis segetum granulosis virus (AsGV) (Agrotis
           segetumgranulovirus)
          Length = 197

 Score =  132 bits (319), Expect = 7e-30
 Identities = 58/86 (67%), Positives = 72/86 (83%), Gaps = 2/86 (2%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHT--DGLIIKVLILCDECC 332
           +VKV+KTG ++LAHY+AQV VSN +SFEFHPGSQP+TFQ + T  + L + V  +CDEC 
Sbjct: 40  RVKVRKTGGAVLAHYYAQVFVSNKFSFEFHPGSQPKTFQNVDTEKEHLPVCVKFMCDECT 99

Query: 331 KKELRDYIKGENSFNVAFKNCESILC 254
           K+ELRDYI+GEN FN+AFKNCESILC
Sbjct: 100 KQELRDYIEGENQFNIAFKNCESILC 125



 Score = 41.9 bits (94), Expect = 0.013
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHKST 75
           +R S QTV++T  +++LL N+  FS             L+  NNY++S P +  C H   
Sbjct: 126 KRKSVQTVIITILIVVLLINLVNFSALNIIVIAFLLILLYIVNNYLLSKPKVSICKHYKL 185

Query: 74  N 72
           N
Sbjct: 186 N 186


>UniRef50_Q0N427 Cluster: Ac81-like protein; n=4;
           Nucleopolyhedrovirus|Rep: Ac81-like protein - Clanis
           bilineata nucleopolyhedrosis virus
          Length = 317

 Score =  129 bits (312), Expect = 5e-29
 Identities = 51/90 (56%), Positives = 70/90 (77%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKK 326
           K++V KT  ++L HY+A + ++N Y FEFHPGSQPRTFQT+HT G ++ V ++C+ECCK 
Sbjct: 155 KIRVTKTMGTMLTHYYAHIKINNDYEFEFHPGSQPRTFQTVHTKGFVVGVYLVCNECCKN 214

Query: 325 ELRDYIKGENSFNVAFKNCESILCGASVFK 236
            LR +I+GEN+FNV FKNCE+ILC    F+
Sbjct: 215 YLRTFIEGENNFNVIFKNCETILCQRHSFQ 244



 Score = 45.2 bits (102), Expect = 0.001
 Identities = 21/58 (36%), Positives = 34/58 (58%)
 Frame = -3

Query: 254 RRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNPCIEFCNHK 81
           +R SFQT+ ++ A+L +  N+ +FS             L+ +NNY+ISNP ++ C HK
Sbjct: 239 QRHSFQTIFVSLALLCVFVNMIEFSWFFIFLVTCIVILLYMNNNYLISNPQVQVCAHK 296


>UniRef50_Q8QLD1 Cluster: Putative uncharacterized protein; n=1;
           Mamestra configurata NPV-A|Rep: Putative uncharacterized
           protein - Mamestra configurata NPV-A
          Length = 173

 Score =  112 bits (270), Expect = 6e-24
 Identities = 48/91 (52%), Positives = 64/91 (70%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKK 326
           KV+V+KT  ++LAHY+AQV VSNG+SFEFHPGSQPRTFQ +HTDG  I ++++CD CCK+
Sbjct: 82  KVRVRKTCGTLLAHYYAQVDVSNGFSFEFHPGSQPRTFQNVHTDGNTIIIMMMCDNCCKE 141

Query: 325 ELRDYIKGENSFNVAFKNCESILCGASVFKR 233
           ELR ++K +       K   +      V KR
Sbjct: 142 ELRTFVKAKTVLMWPLKIARAFCANVKVCKR 172


>UniRef50_Q6JKB2 Cluster: Putative uncharacterized protein; n=3;
           Nucleopolyhedrovirus|Rep: Putative uncharacterized
           protein - Neodiprion sertifer NPV
          Length = 176

 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
 Frame = -1

Query: 505 KVKVKKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQT---IHTDGLIIKVLILCDEC 335
           K  V+K   S+L+H+FA++ + NG  FE HPGSQP TFQ+   + +   ++   + CDEC
Sbjct: 33  KHNVQKFNTSLLSHFFAKIDI-NGQKFEIHPGSQPNTFQSYKPLASVDELVSEFVECDEC 91

Query: 334 CKKELRDYIKGENSFNVAFKNCESILC 254
            KK L  +++ EN FN+   NCE I C
Sbjct: 92  MKKRLIKFVEDENKFNILVNNCEKISC 118


>UniRef50_Q8JKS8 Cluster: Orf33; n=1; Heliothis zea virus 1|Rep:
           Orf33 - Heliothis zea virus 1
          Length = 156

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
 Frame = -1

Query: 502 VKVKKTGASILAHYFAQVHVSNGYSFEFHPGS-QPRTFQTIHTDG--LIIKVLILCDECC 332
           +K  K  + I+AHYF ++        E HPG  Q   F  +++     ++ V   C EC 
Sbjct: 10  IKRLKNSSFIIAHYFIRI---PSLDLEIHPGMYQKGNFLNLNSTKHYRVLTVTYACSECL 66

Query: 331 KKELRDYIKGENSFNVAFK---NCESILCGASV 242
            + L   IK EN  +  +    NCE++  G  +
Sbjct: 67  NELL---IKSENVLHAWYYPLINCETLTKGLCI 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,041,853
Number of Sequences: 1657284
Number of extensions: 8315902
Number of successful extensions: 17683
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17678
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)