Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120885.seq
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   1.6  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   6.5  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   6.5  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   6.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.6  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 547 SILTKTDYLKTQSLAIIGIW 488
           S+  KT+Y K ++LA + IW
Sbjct: 331 SVTIKTEYAKEKNLAGVFIW 350


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 521 EVICFS*NGRIPLLLKLVKIYYNGIAIXR 607
           E++    + RIP + +L+K +++G  + R
Sbjct: 160 EIVLVGGSTRIPKIQQLIKDFFDGKELNR 188


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 521 EVICFS*NGRIPLLLKLVKIYYNG 592
           E++    + RIP + +L+  Y+NG
Sbjct: 161 EIVLVGGSTRIPKVQQLITEYFNG 184


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 521 EVICFS*NGRIPLLLKLVKIYYNG 592
           E++    + RIP + +L+  Y+NG
Sbjct: 161 EIVLVGGSTRIPKVQQLITEYFNG 184


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 608 IDX*LCHYNIFSLTLVEAVFVHFN 537
           +D   CH  I +LT    + + FN
Sbjct: 350 LDWTFCHMMIAALTTYLVILIQFN 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,458
Number of Sequences: 336
Number of extensions: 2454
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)