Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120882.seq
(576 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 34 0.096
SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_38780| Best HMM Match : Astacin (HMM E-Value=0) 33 0.22
SB_31974| Best HMM Match : CUT (HMM E-Value=2.6) 33 0.22
SB_16938| Best HMM Match : Exo_endo_phos (HMM E-Value=2.7e-08) 33 0.22
SB_7230| Best HMM Match : DUF137 (HMM E-Value=2.4) 33 0.22
SB_12357| Best HMM Match : RVT_1 (HMM E-Value=7.69999e-41) 33 0.22
SB_3152| Best HMM Match : RVT_1 (HMM E-Value=5.4006e-42) 33 0.22
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_59306| Best HMM Match : CUT (HMM E-Value=2) 32 0.39
SB_7575| Best HMM Match : Exo_endo_phos (HMM E-Value=3.4e-12) 32 0.39
SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_7269| Best HMM Match : DUF1279 (HMM E-Value=0.19) 30 1.6
SB_32142| Best HMM Match : RVT_1 (HMM E-Value=2.29953e-42) 29 2.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 2.7
SB_43982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_48619| Best HMM Match : DUF1572 (HMM E-Value=0.33) 28 6.3
SB_18338| Best HMM Match : MFS_1 (HMM E-Value=0.038) 28 6.3
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 27 8.3
SB_39152| Best HMM Match : Arteri_nucleo (HMM E-Value=1.9) 27 8.3
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 14 QAEVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSE 193
Q + L E + W+ + + + ++ ++ YEE IT+LE R E AR+ LS
Sbjct: 481 QTTIAQLREEMKLKWKSERKSLFNKNKNKVKQYEENITELEMKVSRLSTENARFQENLSA 540
Query: 194 PTSQ 205
T Q
Sbjct: 541 STKQ 544
>SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 33.9 bits (74), Expect = 0.096
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E A DR + ++ I L+ L E +R L + KL+ PTSQS
Sbjct: 73 HVKDVTYEAATLAFGKSDRRSEDWFDANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 129
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 130 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 167
>SB_38780| Best HMM Match : Astacin (HMM E-Value=0)
Length = 1153
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 418 HVKDVTYEAAMLAFGKSDRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 474
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 475 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 512
>SB_31974| Best HMM Match : CUT (HMM E-Value=2.6)
Length = 183
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 52 HVKDVTYEAAMLAFGKSDRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 108
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 109 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 146
>SB_16938| Best HMM Match : Exo_endo_phos (HMM E-Value=2.7e-08)
Length = 554
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 301 HVKDVTYEAAMLAFGKSDRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 357
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 358 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 395
>SB_7230| Best HMM Match : DUF137 (HMM E-Value=2.4)
Length = 353
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 100 HVKDVTYEAAMLAFGKSDRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 156
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 157 LREARRHAKEECKKCANNYWSNLCAMIQSAADTGNVKG 194
>SB_12357| Best HMM Match : RVT_1 (HMM E-Value=7.69999e-41)
Length = 889
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 347 HVKDVTYEAAMLAFGKSDRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 403
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 404 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 441
>SB_3152| Best HMM Match : RVT_1 (HMM E-Value=5.4006e-42)
Length = 717
Score = 32.7 bits (71), Expect = 0.22
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 135 HVKDVTYEAAMLAFGKSDRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 191
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 192 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 229
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 32.3 bits (70), Expect = 0.29
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +2
Query: 44 KQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX--LP 217
K +E + A DR + ++ I L+ L E +R L + KL+ PTSQS L
Sbjct: 1873 KDVTYEAAMLAFGKSDRRSEDWFDANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEALR 1929
Query: 218 GVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
H K C++C Y+ + +GN G
Sbjct: 1930 EARRHAKEECKKCANDYWSNLCARIQAAADTGNVKG 1965
>SB_59306| Best HMM Match : CUT (HMM E-Value=2)
Length = 309
Score = 31.9 bits (69), Expect = 0.39
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 211 HIKDVTYEAAMLAFGKSDRRNEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 267
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 268 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 305
>SB_7575| Best HMM Match : Exo_endo_phos (HMM E-Value=3.4e-12)
Length = 548
Score = 31.9 bits (69), Expect = 0.39
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +2
Query: 38 HEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX-- 211
H K +E + A DR + + I L+ L E +R L + KL+ PTSQS
Sbjct: 405 HVKDVTYEAAMLAFGKSDRRSEDWFCANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEA 461
Query: 212 LPGVMDHLKSACERCEPKYYLEALXSWRVLLKSGNCVG 325
L H K C++C Y+ + +GN G
Sbjct: 462 LREARRHAKEECKKCANNYWSNLCARIQSAADTGNVKG 499
>SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 35 LHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKL 187
L E+ N++E Q A + ++ E IT++EAL Q++ L +W S L
Sbjct: 157 LREEINMYEAQCIAQLEETKAAKKALSEAITEIEALQLEQKQLLQQWNSSL 207
>SB_7269| Best HMM Match : DUF1279 (HMM E-Value=0.19)
Length = 298
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 17 AEVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRE 163
AE+DA++ E ++ G +E E EER+++++ L ER+ RE
Sbjct: 137 AEIDAVIQENTERVQELQGVTGSRRQEARERNEERLSEIDEL-ERKNRE 184
>SB_32142| Best HMM Match : RVT_1 (HMM E-Value=2.29953e-42)
Length = 590
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 89 DRELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSX--LPGVMDHLKSACERCEP 262
DR + + I L+ L E +R L + KL+ PTSQS L H K C++C
Sbjct: 8 DRRSEDWFGANIAHLQPLIEAKRLALQNF--KLN-PTSQSLEALREARRHAKEECKKCAN 64
Query: 263 KYYLEALXSWRVLLKSGNCVG 325
Y+ + +GN G
Sbjct: 65 NYWSNLCARIQSAADTGNVKG 85
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 5 ANKQAEVDALLHE---KQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARW 175
A+ + EV A+ E Q E+ + F+ + SY +I++LEA E +RR+ +
Sbjct: 371 ASLENEVQAVKRELAGSQRECERHLQDRLQFEYDA-SSYRSKISKLEADLENERRQQEFY 429
Query: 176 FSKLSEPTSQS 208
+KLSE S S
Sbjct: 430 KNKLSEFGSHS 440
>SB_43982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +2
Query: 98 LIESYEERITQLEALCERQRRELARWFSKLSEPTSQSXLP---GVMDHL 235
+IE +E I ++E+L E ++++ SKLSEPT + L G+++HL
Sbjct: 70 VIEKVDEEIKRMESLGEVKKQKNKFDPSKLSEPTDLAELRRFLGMVNHL 118
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +2
Query: 20 EVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSEPT 199
+ + +L E+Q++ +QQ ++H ++ ++S ++ Q L ++ +L + SKLS
Sbjct: 500 QAEKMLQEQQSLQQQQ--QSSHLQQQTLQSQQQSPLQQSQLSDKSLADLLQEPSKLSGQN 557
Query: 200 SQSXLPGVMDHLKSACE 250
P S C+
Sbjct: 558 ISQAGPQEAPSAASICD 574
>SB_48619| Best HMM Match : DUF1572 (HMM E-Value=0.33)
Length = 478
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 182 KLSEPTSQSXLPGVMDHLKSACERCEPKYYLEAL 283
+++E ++ LPG+ D L+ A E CE + ++EA+
Sbjct: 249 EINELHEKAGLPGMDDCLQKAEELCEQEKFIEAM 282
>SB_18338| Best HMM Match : MFS_1 (HMM E-Value=0.038)
Length = 451
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 132 WKXCASVRGVNLPVGLASYLNRLLKVGF 215
W C+S V P+G+ LN L+ + F
Sbjct: 317 WVVCSSYAAVMAPIGMERTLNSLMSIAF 344
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 364 TSPKLDYRPNEKENKDVLGSAKNNVQVKSQNQF 462
TSP DYRP+ L S NV V + ++F
Sbjct: 386 TSPSWDYRPDMSPFHGTLTSPSGNVYVATTDEF 418
>SB_39152| Best HMM Match : Arteri_nucleo (HMM E-Value=1.9)
Length = 308
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 319 RRXIAHLSANPNKSITSPKLD 381
RR AH+SANP S+TS +D
Sbjct: 288 RRRTAHVSANPVFSVTSEHID 308
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,549,477
Number of Sequences: 59808
Number of extensions: 235087
Number of successful extensions: 767
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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