Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120882.seq
(576 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118555-1|AAM49924.1| 743|Drosophila melanogaster LD35784p pro... 30 2.6
AF279146-1|AAF99080.1| 743|Drosophila melanogaster replication ... 30 2.6
AE014298-966|AAF46211.1| 933|Drosophila melanogaster CG4557-PA ... 30 2.6
AE013599-2051|AAF58141.2| 743|Drosophila melanogaster CG8171-PA... 30 2.6
BT023931-1|ABB36435.1| 1135|Drosophila melanogaster RE58741p pro... 29 3.4
AL031582-1|CAA20895.1| 1082|Drosophila melanogaster EG:118B3.2 p... 29 3.4
AF181633-1|AAD55419.1| 949|Drosophila melanogaster EG:118B3.2 p... 29 3.4
AE014298-63|AAF45522.2| 950|Drosophila melanogaster CG13366-PA,... 29 3.4
AE014298-62|ABI30962.1| 1094|Drosophila melanogaster CG13366-PB,... 29 3.4
AE014297-1441|AAF54739.2| 1111|Drosophila melanogaster CG3532-PA... 29 3.4
X62590-1|CAA44475.1| 879|Drosophila melanogaster standard param... 29 4.5
X58722-1|CAA41557.1| 878|Drosophila melanogaster paramyosin pro... 29 4.5
AY069132-1|AAL39277.1| 702|Drosophila melanogaster GH14085p pro... 29 4.5
AE014296-1514|AAN11994.1| 879|Drosophila melanogaster CG5939-PB... 29 4.5
AE014296-1513|AAF50370.1| 879|Drosophila melanogaster CG5939-PA... 29 4.5
AY069495-1|AAL39640.1| 923|Drosophila melanogaster LD22235p pro... 29 6.0
AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein... 29 6.0
AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB... 29 6.0
AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA... 29 6.0
X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein pr... 28 7.9
>AY118555-1|AAM49924.1| 743|Drosophila melanogaster LD35784p
protein.
Length = 743
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 48 KIYGSNRSVLLPILIEN*LKAMKRELPSWKXCASVR 155
KI S R+ L P IE LK + +ELPSW VR
Sbjct: 679 KIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVR 714
>AF279146-1|AAF99080.1| 743|Drosophila melanogaster replication
protein double parked protein.
Length = 743
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 48 KIYGSNRSVLLPILIEN*LKAMKRELPSWKXCASVR 155
KI S R+ L P IE LK + +ELPSW VR
Sbjct: 679 KIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVR 714
>AE014298-966|AAF46211.1| 933|Drosophila melanogaster CG4557-PA
protein.
Length = 933
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 92 RELIESYEERITQLEALCERQRRE 163
+E I+ +ERI LE LC+RQ+ E
Sbjct: 699 QEEIQQQQERIASLEQLCQRQKEE 722
>AE013599-2051|AAF58141.2| 743|Drosophila melanogaster CG8171-PA
protein.
Length = 743
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 48 KIYGSNRSVLLPILIEN*LKAMKRELPSWKXCASVR 155
KI S R+ L P IE LK + +ELPSW VR
Sbjct: 679 KIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVR 714
>BT023931-1|ABB36435.1| 1135|Drosophila melanogaster RE58741p
protein.
Length = 1135
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 92 RELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSXLPGVMDHLKSA 244
REL E YEE+ +L A+ + +++L +L+E L ++ +K A
Sbjct: 511 RELDEGYEEKYHKLRAIAAKLKKKLQEQTQQLNEMEQSGALKEELEAIKLA 561
>AL031582-1|CAA20895.1| 1082|Drosophila melanogaster EG:118B3.2
protein.
Length = 1082
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +2
Query: 2 LANKQAEVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFS 181
L N +++++ L + + + R+ ++ EER+ +L+ C R + EL R
Sbjct: 573 LENARSKIEELEADLSRGDKTDLSEVLDVARKEKDALEERVAELQDQCSRSQAELRRLRD 632
Query: 182 KLSEPTSQSXLPGVMDHLKSACERCEPKYYLEAL 283
+LS T + + V ++ K A E Y LE L
Sbjct: 633 QLSGLTEECKV--VKNNAKCAVSHLE--YRLEQL 662
>AF181633-1|AAD55419.1| 949|Drosophila melanogaster EG:118B3.2
protein.
Length = 949
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +2
Query: 2 LANKQAEVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFS 181
L N +++++ L + + + R+ ++ EER+ +L+ C R + EL R
Sbjct: 428 LENARSKIEELEADLSRGDKTDLSEVLDVARKEKDALEERVAELQDQCSRSQAELRRLRD 487
Query: 182 KLSEPTSQSXLPGVMDHLKSACERCEPKYYLEAL 283
+LS T + + V ++ K A E Y LE L
Sbjct: 488 QLSGLTEECKV--VKNNAKCAVSHLE--YRLEQL 517
>AE014298-63|AAF45522.2| 950|Drosophila melanogaster CG13366-PA,
isoform A protein.
Length = 950
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +2
Query: 2 LANKQAEVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFS 181
L N +++++ L + + + R+ ++ EER+ +L+ C R + EL R
Sbjct: 429 LENARSKIEELEADLSRGDKTDLSEVLDVARKEKDALEERVAELQDQCSRSQAELRRLRD 488
Query: 182 KLSEPTSQSXLPGVMDHLKSACERCEPKYYLEAL 283
+LS T + + V ++ K A E Y LE L
Sbjct: 489 QLSGLTEECKV--VKNNAKCAVSHLE--YRLEQL 518
>AE014298-62|ABI30962.1| 1094|Drosophila melanogaster CG13366-PB,
isoform B protein.
Length = 1094
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +2
Query: 2 LANKQAEVDALLHEKQNIWEQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFS 181
L N +++++ L + + + R+ ++ EER+ +L+ C R + EL R
Sbjct: 573 LENARSKIEELEADLSRGDKTDLSEVLDVARKEKDALEERVAELQDQCSRSQAELRRLRD 632
Query: 182 KLSEPTSQSXLPGVMDHLKSACERCEPKYYLEAL 283
+LS T + + V ++ K A E Y LE L
Sbjct: 633 QLSGLTEECKV--VKNNAKCAVSHLE--YRLEQL 662
>AE014297-1441|AAF54739.2| 1111|Drosophila melanogaster CG3532-PA
protein.
Length = 1111
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 92 RELIESYEERITQLEALCERQRRELARWFSKLSEPTSQSXLPGVMDHLKSA 244
REL E YEE+ +L A+ + +++L +L+E L ++ +K A
Sbjct: 511 RELDEGYEEKYHKLRAIAAKLKKKLQEQTQQLNEMEQSGALKEELEAIKLA 561
>X62590-1|CAA44475.1| 879|Drosophila melanogaster standard
paramyosin protein.
Length = 879
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 47 QNIWEQQVGAAAHFDRELIESYEERITQLE 136
QN W +V A A E+ Y+ RIT+LE
Sbjct: 301 QNKWNSEVAARAEEVEEIRRKYQVRITELE 330
>X58722-1|CAA41557.1| 878|Drosophila melanogaster paramyosin
protein.
Length = 878
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 47 QNIWEQQVGAAAHFDRELIESYEERITQLE 136
QN W +V A A E+ Y+ RIT+LE
Sbjct: 301 QNKWNSEVAARAEEVEEIRRKYQVRITELE 330
>AY069132-1|AAL39277.1| 702|Drosophila melanogaster GH14085p
protein.
Length = 702
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 47 QNIWEQQVGAAAHFDRELIESYEERITQLE 136
QN W +V A A E+ Y+ RIT+LE
Sbjct: 301 QNKWNSEVAARAEEVEEIRRKYQVRITELE 330
>AE014296-1514|AAN11994.1| 879|Drosophila melanogaster CG5939-PB,
isoform B protein.
Length = 879
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 47 QNIWEQQVGAAAHFDRELIESYEERITQLE 136
QN W +V A A E+ Y+ RIT+LE
Sbjct: 301 QNKWNSEVAARAEEVEEIRRKYQVRITELE 330
>AE014296-1513|AAF50370.1| 879|Drosophila melanogaster CG5939-PA,
isoform A protein.
Length = 879
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 47 QNIWEQQVGAAAHFDRELIESYEERITQLE 136
QN W +V A A E+ Y+ RIT+LE
Sbjct: 301 QNKWNSEVAARAEEVEEIRRKYQVRITELE 330
>AY069495-1|AAL39640.1| 923|Drosophila melanogaster LD22235p
protein.
Length = 923
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 59 EQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSE 193
EQ + A A + YEER + + + + R E W + + E
Sbjct: 158 EQTILARAQDNERFQAEYEERFQEFDTVVRKSRNEYKNWLAAVGE 202
>AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein
protein.
Length = 1177
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 59 EQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSE 193
EQ + A A + YEER + + + + R E W + + E
Sbjct: 412 EQTILARAQDNERFQAEYEERFQEFDTVVRKSRNEYKNWLAAVGE 456
>AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB,
isoform B protein.
Length = 1177
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 59 EQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSE 193
EQ + A A + YEER + + + + R E W + + E
Sbjct: 412 EQTILARAQDNERFQAEYEERFQEFDTVVRKSRNEYKNWLAAVGE 456
>AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA,
isoform A protein.
Length = 1177
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 59 EQQVGAAAHFDRELIESYEERITQLEALCERQRRELARWFSKLSE 193
EQ + A A + YEER + + + + R E W + + E
Sbjct: 412 EQTILARAQDNERFQAEYEERFQEFDTVVRKSRNEYKNWLAAVGE 456
>X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein
protein.
Length = 700
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 328 IAHLSANPNKSITSPKLDYRPNEKENKDVL-GSAKNNVQVK 447
I+ + +N +K+ T K+DY PN ++ K L GS + Q++
Sbjct: 328 ISEIFSNLDKNFTFLKVDYHPNREKAKRALDGSMRKGRQLR 368
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,054,718
Number of Sequences: 53049
Number of extensions: 357418
Number of successful extensions: 1714
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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