Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120881.seq
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519356-1|ABP68465.1|  500|Anopheles gambiae LRIM1 protein.           24   3.5  
EF519351-1|ABP68460.1|  486|Anopheles gambiae LRIM1 protein.           24   3.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.2  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   8.2  

>EF519356-1|ABP68465.1|  500|Anopheles gambiae LRIM1 protein.
          Length = 500

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 92  LQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWD 238
           LQ+   ++ + + + E+    ++  I     + ++   ++QNN IR WD
Sbjct: 412 LQQAVGLIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWD 460


>EF519351-1|ABP68460.1|  486|Anopheles gambiae LRIM1 protein.
          Length = 486

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 92  LQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTWD 238
           LQ+   ++ + + + E+    ++  I     + ++   ++QNN IR WD
Sbjct: 412 LQQAVGLIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWD 460


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 116  VVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTI 226
            +V  + +  H  N    +D  K+D FM L + +NN++
Sbjct: 1649 IVNIDDIRVH-ENPDGSVDRTKSDMFMHLVDQKNNSV 1684


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 230 TWDAVVKNAKKYPISTK 280
           TWDA+ K+ +K  +STK
Sbjct: 80  TWDALQKHHQKTTMSTK 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,092
Number of Sequences: 2352
Number of extensions: 12426
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)