Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120880.seq
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q00732 Cluster: p48 protein; n=16; Nucleopolyhedrovirus... 194 2e-48
UniRef50_P24651 Cluster: p48 protein; n=7; Nucleopolyhedrovirus|... 107 3e-22
UniRef50_Q4KSY4 Cluster: P45; n=3; Nucleopolyhedrovirus|Rep: P45... 76 9e-13
UniRef50_A0EYY5 Cluster: P45; n=4; Nucleopolyhedrovirus|Rep: P45... 69 1e-10
UniRef50_Q7T9U6 Cluster: ORF_69; n=9; Granulovirus|Rep: ORF_69 -... 49 9e-05
UniRef50_UPI0000E87B62 Cluster: Lipoate-protein ligase B; n=1; M... 34 3.4
UniRef50_UPI0000DD867B Cluster: PREDICTED: hypothetical protein;... 33 7.9
UniRef50_A2F2K7 Cluster: Dynein heavy chain family protein; n=1;... 33 7.9
>UniRef50_Q00732 Cluster: p48 protein; n=16;
Nucleopolyhedrovirus|Rep: p48 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 387
Score = 194 bits (473), Expect = 2e-48
Identities = 108/185 (58%), Positives = 117/185 (63%)
Frame = +1
Query: 1 GMPLMLYVLLRTDYKNESDRY*RKQFDYTDICAIFL*LDLRQSVFFVHKTRHVRAICQRM 180
GMPLMLYVLLRTDYKNESD F L ++ K +
Sbjct: 170 GMPLMLYVLLRTDYKNESDIINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKEC 229
Query: 181 QKSNHRIAPRGSRARVEYFERAMQRFSTAANGNRLLLPFKNFMIKMGRNTNMKKVNKIAS 360
+K+ + + ST ANG+RLLLPFKNFMI+MGRNT MKKVNKIAS
Sbjct: 230 KKATVGLRQEDHERVLSILSAQCNGCSTVANGDRLLLPFKNFMIEMGRNTKMKKVNKIAS 289
Query: 361 TVLIGFYLRHYLESLPNKAYPVAELELRNVCRFIMSKYSDENINLLIHK*N*SK*IFVTW 540
TVLIGFYLRHYLESLPNKAYPVAELELRNVCRFIMSKYSDENINLLIHK K
Sbjct: 290 TVLIGFYLRHYLESLPNKAYPVAELELRNVCRFIMSKYSDENINLLIHKLKLIKIDICNV 349
Query: 541 LMTEM 555
LMTEM
Sbjct: 350 LMTEM 354
Score = 140 bits (340), Expect = 2e-32
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +2
Query: 44 KTKVTVINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHER 223
K + +INENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKAT+GLRQEDHER
Sbjct: 184 KNESDIINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATVGLRQEDHER 243
Query: 224 VLSILNAQCN 253
VLSIL+AQCN
Sbjct: 244 VLSILSAQCN 253
Score = 49.6 bits (113), Expect = 6e-05
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +3
Query: 507 MKLIKIDICNVANDRNGLWPESFIRAHSFTKYQLDNEISL 626
+KLIKIDICNV + PE+FIR H TKYQLDNEISL
Sbjct: 339 LKLIKIDICNVLMTEM-IVPETFIR-HIITKYQLDNEISL 376
>UniRef50_P24651 Cluster: p48 protein; n=7;
Nucleopolyhedrovirus|Rep: p48 protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 411
Score = 107 bits (256), Expect = 3e-22
Identities = 64/189 (33%), Positives = 103/189 (54%), Gaps = 20/189 (10%)
Frame = +1
Query: 1 GMPLMLYVLLRTDYKNESDRY*RKQFDYTDICAIFL*LDLRQSVFFVH-KTRHVRAICQR 177
GMPL++YV+ +TD+ ++ D T + F L + +H K + + +
Sbjct: 174 GMPLLIYVISKTDFSSQPDVVNENNL-MTQMFVQFFYNLLCDKAYSMHTKQKACEPLVKD 232
Query: 178 MQKSNHRIAPRGSRARVEYFERAMQRFSTAANGNRLLLPFKNFMIKMGRNTNMKKVNKIA 357
++ ++ + + STAAN +LL+PFKNFMIKMG++T +KKVNKIA
Sbjct: 233 CKRVITLLSAKDRHRLLTMLNEQCNSASTAANAPKLLMPFKNFMIKMGQHTKIKKVNKIA 292
Query: 358 STVLIGFYLRHYLESLPN-------------------KAYPVAELELRNVCRFIMSKYSD 480
+TVLIGF+LR Y+ES+P+ + AELE+ NVCR+I +YSD
Sbjct: 293 ATVLIGFFLRQYIESMPSHYLQNLRGLLKDEHNDSRDEGCSAAELEMLNVCRYIFKRYSD 352
Query: 481 ENINLLIHK 507
+++ +++ K
Sbjct: 353 KDVAVVVEK 361
Score = 94.7 bits (225), Expect = 2e-18
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +2
Query: 59 VINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSIL 238
V+NENNL+TQ+FVQFFYNL+CDKAYS++TK+ C P VK+CK+ L +D R+L++L
Sbjct: 193 VVNENNLMTQMFVQFFYNLLCDKAYSMHTKQKACEPLVKDCKRVITLLSAKDRHRLLTML 252
Query: 239 NAQCN 253
N QCN
Sbjct: 253 NEQCN 257
>UniRef50_Q4KSY4 Cluster: P45; n=3; Nucleopolyhedrovirus|Rep: P45 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 378
Score = 75.8 bits (178), Expect = 9e-13
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +1
Query: 277 NRLLLPFKNFMIKMGRNTNMK--KVNKIASTVLIGFYLRHYLESLPNKAYPVAELELRNV 450
++L PFK F+ ++ T +K K+NKIAS V GF+LR YLE+ NK AELE+RNV
Sbjct: 254 SKLFSPFKRFITELALKTKIKSPKINKIASIVFTGFFLRLYLEASTNKTKSAAELEMRNV 313
Query: 451 CRFIMSKYSDENINLLIHK 507
CRFI Y D+ + K
Sbjct: 314 CRFIFHNYDDDKFEKFMLK 332
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +2
Query: 59 VINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVL 229
V N ++LIT F QFFYNL+CDKA + Y C +KEC+ GL D E++L
Sbjct: 187 VFNADDLITNSFTQFFYNLLCDKATTGYLNFKACASLIKECRLVAGGLGDGDLEQLL 243
>UniRef50_A0EYY5 Cluster: P45; n=4; Nucleopolyhedrovirus|Rep: P45 -
Ecotropis obliqua NPV
Length = 397
Score = 68.9 bits (161), Expect = 1e-10
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Frame = +1
Query: 1 GMPLMLYVLLRTDYKNESDRY*RKQFDYTDICAIFL*LDLRQSVFFVHKTRHVRAICQRM 180
G+PL +Y+L++TDY N + F L +SV +++ V+ + Q +
Sbjct: 171 GLPLFIYILMKTDYDNNGI-FNSDDLMTNAFATFFYNLLSDKSVKYIN----VKTV-QGL 224
Query: 181 QKSNHRIAPRGSRARVEYFERAMQRFSTAANGNRLLLPFKNFMIKMGRNTNMK--KVNKI 354
R+ ++E+ ++ +T L LPFKNF+I++ T +K K+NKI
Sbjct: 225 VDECRRVTASFDVQQLEFLLCMLRNKNTC--DTPLFLPFKNFIIQLACKTKIKQAKINKI 282
Query: 355 ASTVLIGFYLRHYLE--------------SLPNKAYPVA---------ELELRNVCRFIM 465
AS V GFYLR Y+E S K YP E+ELRNVCRF++
Sbjct: 283 ASVVFTGFYLRIYIEAATPRLINNQNGNNSALRKQYPFGGPGKTLTPYEMELRNVCRFLL 342
Query: 466 SKYSDENINLLIHK 507
Y++E I+K
Sbjct: 343 PTYTNEQFENFINK 356
Score = 39.1 bits (87), Expect = 0.091
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 59 VINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDHERVLSIL 238
+ N ++L+T F FFYNL+ DK+ Y V EC++ T + E +L +L
Sbjct: 189 IFNSDDLMTNAFATFFYNLLSDKSVK-YINVKTVQGLVDECRRVTASFDVQQLEFLLCML 247
Query: 239 NAQCNVSPPL 268
+ PL
Sbjct: 248 RNKNTCDTPL 257
>UniRef50_Q7T9U6 Cluster: ORF_69; n=9; Granulovirus|Rep: ORF_69 -
Adoxophyes orana granulovirus (AoGV)
Length = 396
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 59 VINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDH 217
V N +N++T +QFFYNL+ DKA S + C + C++ IGL +H
Sbjct: 204 VFNVDNIVTNTLLQFFYNLLSDKATSCFWNMKKCNILIDNCRQYVIGLNDAEH 256
Score = 42.3 bits (95), Expect = 0.010
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 238 ERAMQRFSTAANGNRLLLPFKNFMIKMGRNTNMKKVNKIASTVLIGFYLRHYLES----- 402
E + ++ +L P + F+ K + ++K+ K+ + IGFYLR YLE+
Sbjct: 255 EHLLINLNSHTYNTKLYTPLRQFVEK---HFSLKQAGKLVHKIFIGFYLRIYLEAKKRND 311
Query: 403 LPNK---AYPVAELELRNVCRFIMSKYSDENINLLIHK 507
NK V +E+RNVCR + Y ++ +I K
Sbjct: 312 ARNKHKVNINVFNIEMRNVCRVLFRDYDNDEFENIIDK 349
>UniRef50_UPI0000E87B62 Cluster: Lipoate-protein ligase B; n=1;
Methylophilales bacterium HTCC2181|Rep: Lipoate-protein
ligase B - Methylophilales bacterium HTCC2181
Length = 203
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 38 ITKTKVTVINENNLITQIFVQFFYNLICDKAYSLYTKRDMCVPFVKECKKATIGLRQEDH 217
+TK K+T+ +L+ +QF L S TK+D ++ ECK A+IGLR + H
Sbjct: 86 LTKYKITIKEFVSLLENSIMQFLAKL----NVSSCTKKDAPGVYIGECKIASIGLRLKKH 141
>UniRef50_UPI0000DD867B Cluster: PREDICTED: hypothetical protein;
n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 299
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 148 TRHVRAICQRMQKSNHRIAPRGSRARVEYFERAMQRFSTAANGNRLLLPFKNF 306
+ H RA+ + + R APRGSR R + FE R T G +LPF+ F
Sbjct: 207 SEHFRALHTQQPQEAARGAPRGSRGRGDSFESRPARRRT---GAARILPFRRF 256
>UniRef50_A2F2K7 Cluster: Dynein heavy chain family protein; n=1;
Trichomonas vaginalis G3|Rep: Dynein heavy chain family
protein - Trichomonas vaginalis G3
Length = 3919
Score = 32.7 bits (71), Expect = 7.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 32 GPITKTKVTVINENNLITQIFVQFFYNLICDKA 130
G + KTK ++ + +T F +F Y L+CDK+
Sbjct: 1796 GTLEKTKHRILRFDGAVTPKFAKFLYQLVCDKS 1828
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,529,609
Number of Sequences: 1657284
Number of extensions: 13015744
Number of successful extensions: 33223
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33194
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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