Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120878.seq
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.1  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.9  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   6.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 551 RIAFFRRDQRPNASRWCW 604
           R+A+FR D   N   W W
Sbjct: 193 RLAYFREDLGINLHHWHW 210


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 94  IVSFDACITYKSPCSPD 144
           ++++  C+  K PCSP+
Sbjct: 53  LLNYINCLLEKGPCSPE 69


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 112 CITYKSPCSPD 144
           C+  K PC+PD
Sbjct: 48  CLLEKKPCTPD 58


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 573 TNARTHRGGVGRFNYLTITVDFC 641
           +N   +R G+GR+    + VD C
Sbjct: 29  SNWAIYRPGIGRYAQEDLPVDLC 51


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 61  VAAPYPRALAPYCCRYKY 8
           VAA +PR   P  C+Y Y
Sbjct: 179 VAATHPRYADPDDCQYFY 196


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 551 RIAFFRRDQRPNASRWCW 604
           R+A++R D   N   W W
Sbjct: 193 RVAYWREDIGLNLHHWHW 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,334
Number of Sequences: 336
Number of extensions: 3235
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)