Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120877.seq
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.10 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 114 DQHERIRASVHVRQTVVRGFAHIFVDEPFKLWLERNTHEFDNNT 245
           +  E++  S  V +   RGF  +++ EP   ++ +   EFD  T
Sbjct: 486 ESKEQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQMKEFDGKT 529


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 160 TVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRR 50
           ++  TC    I++ WS   +  +KN +  +   N+RR
Sbjct: 199 SIIATCYAIIIITIWSKNAKGFIKNTKAVNGSDNSRR 235


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 419 CTCPLYNSA*YTRRRNRICNPISC 348
           CTCPL  S    +  +  C   SC
Sbjct: 9   CTCPLGFSGINCQTNDEDCTETSC 32


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 207 WLERNTHEFDNNTD 248
           +++RN+ EFDN T+
Sbjct: 371 FVQRNSTEFDNATE 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,680
Number of Sequences: 336
Number of extensions: 3134
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)