Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120877.seq
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M89955-1|AAA35491.1|  377|Homo sapiens 5-HT1D-type serotonin rec...    33   1.2  
M81589-1|AAA60315.1|  377|Homo sapiens serotonin 1D receptor pro...    33   1.2  
BT007027-1|AAP35673.1|  377|Homo sapiens 5-hydroxytryptamine (se...    33   1.2  
BC007720-1|AAH07720.1|  377|Homo sapiens 5-hydroxytryptamine (se...    33   1.2  
AL049576-1|CAB81617.1|  377|Homo sapiens 5-hydroxytryptamine (se...    33   1.2  
AF498979-1|AAM21126.1|  377|Homo sapiens 5-hydroxytryptamine rec...    33   1.2  

>M89955-1|AAA35491.1|  377|Homo sapiens 5-HT1D-type serotonin
           receptor protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 214 SSHSLNGSSTKMCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRRI 47
           S+ SLN + T     PRT   L  +LA +LS  +L   T+L N  V + I  TR++
Sbjct: 16  SNRSLNATETSEAWDPRTLQALKISLAVVLSVITLA--TVLSNAFVLTTILLTRKL 69


>M81589-1|AAA60315.1|  377|Homo sapiens serotonin 1D receptor
           protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 214 SSHSLNGSSTKMCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRRI 47
           S+ SLN + T     PRT   L  +LA +LS  +L   T+L N  V + I  TR++
Sbjct: 16  SNRSLNATETSEAWDPRTLQALKISLAVVLSVITLA--TVLSNAFVLTTILLTRKL 69


>BT007027-1|AAP35673.1|  377|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 1D protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 214 SSHSLNGSSTKMCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRRI 47
           S+ SLN + T     PRT   L  +LA +LS  +L   T+L N  V + I  TR++
Sbjct: 16  SNRSLNATETSEAWDPRTLQALKISLAVVLSVITLA--TVLSNAFVLTTILLTRKL 69


>BC007720-1|AAH07720.1|  377|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 1D protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 214 SSHSLNGSSTKMCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRRI 47
           S+ SLN + T     PRT   L  +LA +LS  +L   T+L N  V + I  TR++
Sbjct: 16  SNRSLNATETSEAWDPRTLQALKISLAVVLSVITLA--TVLSNAFVLTTILLTRKL 69


>AL049576-1|CAB81617.1|  377|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 1D protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 214 SSHSLNGSSTKMCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRRI 47
           S+ SLN + T     PRT   L  +LA +LS  +L   T+L N  V + I  TR++
Sbjct: 16  SNRSLNATETSEAWDPRTLQALKISLAVVLSVITLA--TVLSNAFVLTTILLTRKL 69


>AF498979-1|AAM21126.1|  377|Homo sapiens 5-hydroxytryptamine
           receptor 1D protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 214 SSHSLNGSSTKMCAKPRTTVCLTCTLARILSCWSLC*RTLLKNLQVFSNICNTRRI 47
           S+ SLN + T     PRT   L  +LA +LS  +L   T+L N  V + I  TR++
Sbjct: 16  SNRSLNATETSEAWDPRTLQALKISLAVVLSVITLA--TVLSNAFVLTTILLTRKL 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,415,373
Number of Sequences: 237096
Number of extensions: 1670206
Number of successful extensions: 3640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3640
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)