Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120874.seq
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    27   0.13 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.90 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   6.3  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   8.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.4  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +2

Query: 311 RVLSNIWSIFMIKSAPMISLISIVFNIVIAKASWSSV 421
           +++S + SIF++ SA  I L S++FN    +  WSS+
Sbjct: 17  KIVSFVNSIFLVMSAVTIILSSLIFN----QEQWSSL 49


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 206 KLRCWSSFLKI 238
           +L CWSSFLKI
Sbjct: 547 QLYCWSSFLKI 557


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = +3

Query: 216 VGPRSSKSFNFILIYEVKHLIL 281
           +GP+S+K ++F+L+  +  L++
Sbjct: 18  IGPKSNKIYSFLLLTTLTLLVI 39


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +3

Query: 195 YCIQSCAVGPRSSKSFNFILIYEVKHLILHYHFQYLNMKE 314
           YC  S ++ P S+  + F  +  +  L     F +LN  E
Sbjct: 555 YCYYSISIRPISTLGWFFWSLLRIYELARKAAFAHLNSNE 594


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 94  GNKVTFLLHNLNELSSPPYAQL 159
           G  + F  HN + LS PP A +
Sbjct: 121 GAALPFFCHNGDPLSQPPPAHM 142


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 94  GNKVTFLLHNLNELSSPPYAQL 159
           G  + F  HN + LS PP A +
Sbjct: 13  GAALPFFCHNGDPLSQPPPAHM 34


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 597 KYRRLLSDLEDFIYSCLISEQLVILCKVAGK 505
           K   LLS  E+      I  QLV +CK   K
Sbjct: 200 KLNHLLSGTENLDLVLPIYSQLVFMCKKINK 230


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 247 KLKDFEERGPTAQLWIQYFNMVSLAKEFLR 158
           K++DF   GP ++  +  F ++     FLR
Sbjct: 352 KIRDFYYEGPNSENNLDNFYLIHTDTYFLR 381


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 309 KECYLIYGQYL 341
           +EC ++YG+YL
Sbjct: 18  EECGMLYGEYL 28


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 309 KECYLIYGQYL 341
           +EC ++YG+YL
Sbjct: 18  EECGMLYGEYL 28


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 309 KECYLIYGQYL 341
           +EC ++YG+YL
Sbjct: 18  EECGMLYGEYL 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,259
Number of Sequences: 336
Number of extensions: 3207
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)