Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120874.seq
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75) 73 3e-13
SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_36117| Best HMM Match : Rubredoxin (HMM E-Value=1.8) 61 6e-10
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 60 1e-09
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 57 1e-08
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_52361| Best HMM Match : EutS (HMM E-Value=1) 54 1e-07
SB_24133| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_10195| Best HMM Match : CXC (HMM E-Value=0.003) 51 9e-07
SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95) 49 3e-06
SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47) 48 5e-06
SB_49331| Best HMM Match : DUF352 (HMM E-Value=0.47) 48 5e-06
SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037) 46 2e-05
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_10893| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_9251| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0) 43 2e-04
SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013) 41 0.001
SB_49670| Best HMM Match : TIR (HMM E-Value=1.2) 39 0.003
SB_48845| Best HMM Match : CheW (HMM E-Value=1.5) 38 0.005
SB_9577| Best HMM Match : Phage_tail_U (HMM E-Value=9.2) 38 0.009
SB_17898| Best HMM Match : Entericidin (HMM E-Value=4.3) 37 0.012
SB_17226| Best HMM Match : zf-UBR1 (HMM E-Value=5.8) 37 0.012
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_28042| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_56468| Best HMM Match : Bundlin (HMM E-Value=8.7) 37 0.015
SB_10274| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_26427| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_23936| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_40157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_28799| Best HMM Match : SEC-C (HMM E-Value=0.95) 31 0.76
SB_50941| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8) 29 2.3
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_6643| Best HMM Match : Antimicrobial_8 (HMM E-Value=0.27) 28 7.1
SB_41184| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=10) 27 9.4
SB_25392| Best HMM Match : PHD (HMM E-Value=0.0062) 27 9.4
>SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)
Length = 1167
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = -3
Query: 217 TAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDM 38
TA L + Y M+ + ++ ++AER G+W HL V +MLPYF +SGH Y KSA++YLQ M
Sbjct: 705 TAVLRLSYMRMIDILQKSIKAERTGNWDLHLQSVLDMLPYFAASGHKLYEKSAYIYLQKM 764
Query: 37 MQLQDSMDPEVY 2
+L ++ P VY
Sbjct: 765 REL-EAKHPSVY 775
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -3
Query: 622 ISPPPDGSEVSKIIVRLGGFHLLMSYLGAIGYIMQGSG*K 503
I P+ SE+ I++RLG HL MS+LG+IG++M GSG K
Sbjct: 483 IENEPEDSELRPIVLRLGALHLHMSFLGSIGHLMAGSGLK 522
>SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = -3
Query: 247 KLKDFEERGPTAQLWIQYF-NMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPY 71
+L D T++LW+ F V + +++AER GDW HL VK+MLPYF +S H Y
Sbjct: 586 RLDDVASLSKTSKLWVDCFIKPVFIMMLYVQAEREGDWPLHLVAVKKMLPYFFASAHVNY 645
Query: 70 AKSAHLYLQDMMQLQD 23
+ YL+ M +L D
Sbjct: 646 ERWGLYYLRSMERLGD 661
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -3
Query: 562 HLLMSYLGAIGYIMQGSG 509
++LMS+ GA+G +MQGSG
Sbjct: 515 NMLMSFFGAVGILMQGSG 532
>SB_36117| Best HMM Match : Rubredoxin (HMM E-Value=1.8)
Length = 996
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = -3
Query: 205 WIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQ 26
W Y +VSL +RAER G W+ HL+ V EM PYF+S Y++ +Y+ DM L
Sbjct: 545 WNNYIEVVSLLLRLIRAEREGSWELHLTSVNEMFPYFYSMDRINYSRWLPVYVADMRML- 603
Query: 25 DSMDPEVY 2
S PEV+
Sbjct: 604 PSTAPEVH 611
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = -3
Query: 217 TAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDM 38
T W++Y +MV L +F++AER G+W+ HL+ M+P+F S Y++ +Y+ DM
Sbjct: 379 TFDFWMRYMSMVKLLLQFIKAERTGNWELHLALTAAMIPHFFSMDRPNYSRWLPVYISDM 438
Query: 37 MQLQ 26
QL+
Sbjct: 439 RQLE 442
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -3
Query: 196 YFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSM 17
Y VSL F+RAER G W+ H + V EM+PYF+S Y++ +Y+ DM L S
Sbjct: 733 YIEAVSLLLRFIRAEREGSWELHRTSVNEMIPYFYSIDRINYSRWLPVYVADMRML-PST 791
Query: 16 DPEVY 2
PEV+
Sbjct: 792 APEVH 796
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 583 IVRLGGFHLLMSYLGAIGYIMQGSG 509
++R+GGFH+ ++L IG I Q SG
Sbjct: 602 VIRMGGFHIAFNFLAVIGKIFQDSG 626
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = -3
Query: 217 TAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDM 38
T W++Y +MV L +F++AER G+W+ HL+ M+ +F S Y++ +Y+ DM
Sbjct: 242 TFDFWMRYMSMVKLLLQFIKAERTGNWELHLASTAAMISHFFSMDRPNYSRWLPVYISDM 301
Query: 37 MQLQ 26
QL+
Sbjct: 302 RQLE 305
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -3
Query: 232 EERGPTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHL 53
+E+ P ++ QY MV F+RA R G+W HL ++ YF + YA+ +
Sbjct: 1223 KEKYPLFKVVRQYMRMVMEMMTFIRAVRTGNWALHLEALEVFTTYFFAHDMLNYARMIPV 1282
Query: 52 YLQDMMQLQDSMDPEVY 2
YL +M +L++S DPE+Y
Sbjct: 1283 YLAEMSRLEES-DPEIY 1298
>SB_52361| Best HMM Match : EutS (HMM E-Value=1)
Length = 682
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = -3
Query: 232 EERGPTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHL 53
+E+ P ++ QY MV F+RA R G+W HL ++ YF + YA+ +
Sbjct: 482 KEKYPLFKVVRQYMRMVMEMMTFIRAVRTGNWALHLEALEVFTKYFSAHDMLNYARMIPV 541
Query: 52 YLQDMMQLQDSMDPEVY 2
+L +M +L++S DPE+Y
Sbjct: 542 FLAEMSRLEES-DPEIY 557
>SB_24133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = -3
Query: 232 EERGPTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHL 53
+E A+ W+ Y ++ L L A R G W+ +LSC++E++P+ + YA+
Sbjct: 206 KEGSDLAKFWLSYQDLCELLFNLLYATRTGGWELYLSCIEEVIPWAFAYDRQNYARYLVP 265
Query: 52 YLQDMMQLQDSMDPE 8
YL DM L ++M PE
Sbjct: 266 YLDDMRSLPETM-PE 279
>SB_10195| Best HMM Match : CXC (HMM E-Value=0.003)
Length = 1365
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = -3
Query: 199 QYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDS 20
QY MV F+RA R G+W HL ++ YF + YA+ +YL + +L++S
Sbjct: 660 QYMGMVMEMMTFIRAVRTGNWALHLEALEVFTKYFFAHDMLNYARMIPVYLAEKSRLEES 719
Query: 19 MDPEVY 2
DPE+Y
Sbjct: 720 -DPEIY 724
>SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 202 IQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQD 23
++ MV F+RA R GDWK HL+ ++ + YF + YA+ LYL + MQ+ +
Sbjct: 450 LKLLRMVMEMLLFVRAVRTGDWKLHLTSLELLTKYFFAHDRLNYARMVPLYLPE-MQMLE 508
Query: 22 SMDPEVY 2
+ DP +Y
Sbjct: 509 ATDPAIY 515
>SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 1037
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -3
Query: 217 TAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHS 89
T W++Y +MV L +F++AER G+W+ HL+ M+P+F S
Sbjct: 678 TFDFWMRYMSMVKLLLQFIKAERTGNWELHLASTAAMIPHFFS 720
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 598 EVSKIIVRLGGFHLLMSYLGAIGYIMQGSG 509
E + ++RLGGFH+ +++L +G SG
Sbjct: 538 EFANTVIRLGGFHIALNFLSLLGKKFASSG 567
>SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47)
Length = 690
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = -3
Query: 208 LWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQL 29
L+ QY MV + LRA R G+W+ HLSCV++M+ + + YA+ YL +M L
Sbjct: 482 LFKQYM-MVEILLGLLRASREGNWELHLSCVRDMISLCFAYDNINYARYLSAYLSEMSHL 540
Query: 28 QDSMDPEV 5
D+ P+V
Sbjct: 541 -DTEHPDV 547
>SB_49331| Best HMM Match : DUF352 (HMM E-Value=0.47)
Length = 586
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = -3
Query: 208 LWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQL 29
L+ QY MV + LRA R G+W+ HLSCV++M+ + + YA+ YL +M L
Sbjct: 482 LFKQYM-MVEILLGLLRASREGNWELHLSCVRDMISLCFAYDNINYARYLSAYLSEMSHL 540
Query: 28 QDSMDPEV 5
D+ P+V
Sbjct: 541 -DTEHPDV 547
>SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037)
Length = 926
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -3
Query: 166 FLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDPEVY 2
F+RA R G+W HL ++ YF + YA+ ++L +M +L++S DPE+Y
Sbjct: 3 FIRAVRTGNWALHLEALEVFTKYFSAHDMLNYARMIPVFLAEMSRLEES-DPEIY 56
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -3
Query: 211 QLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDM-- 38
+ W Y + V L F+RAER G W HL+ V EM P+F Y+ +
Sbjct: 140 RFWDLYIDAVMLLLCFIRAEREGSWNLHLNAVAEMAPFFFCMDRINYSSEIQCTFSQVWT 199
Query: 37 -MQLQDSMDPE 8
M L+ S++ E
Sbjct: 200 DMALEQSVNRE 210
Score = 32.7 bits (71), Expect = 0.25
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = -3
Query: 586 IIVRLGGFHLLMSYLGAIGYIMQGS 512
+I+R+GGFH+ ++++ AIG + Q S
Sbjct: 1 MIIRMGGFHIALNFIAAIGKMFQDS 25
>SB_10893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = -3
Query: 211 QLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQ 32
Q W Y + L F+R+ R+ D+ + + +MLP+F + H Y++ ++++DM +
Sbjct: 34 QYWYTYLQLELLLLVFVRSVRLDDFDMYRDALYKMLPWFFALNHTHYSRWLRVHVKDMCE 93
Query: 31 LQDSMDPEV 5
L D P+V
Sbjct: 94 L-DMKAPDV 101
>SB_9251| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0)
Length = 928
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 205 WIQYFNMVS-LAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQL 29
W+ Y + V + LRA R G+WK HL ++ ++P+ + YA+ Y M +L
Sbjct: 770 WMSYIDFVEGIILGLLRASREGNWKLHLMAIRNLIPWCFAYDRVNYARYLTPYFAQMTRL 829
Query: 28 QDSMDPEV 5
++ PEV
Sbjct: 830 KED-HPEV 836
>SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013)
Length = 940
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -3
Query: 607 DGSEVSKIIVRLGGFHLLMSYLGAIGYIMQGSG 509
+ SE+ +I++RLG HL MS+LG+I ++M GSG
Sbjct: 676 EDSELRQIVLRLGALHLHMSFLGSICHLMAGSG 708
>SB_49670| Best HMM Match : TIR (HMM E-Value=1.2)
Length = 512
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = -3
Query: 220 PTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQD 41
PT + W + L +RA+R ++ ++ ++E++P F H YAK ++++D
Sbjct: 384 PTFRFWNAILHYQMLVLLVVRAQRQRNFVLYVEALEELVPLFFVLDHVNYAKWTSIHIRD 443
Query: 40 MMQLQDSM 17
M L S+
Sbjct: 444 MKSLPQSI 451
>SB_48845| Best HMM Match : CheW (HMM E-Value=1.5)
Length = 368
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = -3
Query: 220 PTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQD 41
PT + W + L +RA+R ++ ++ ++E++P F H YA+ ++++D
Sbjct: 5 PTFRFWNAILHYQMLVLLVVRAQRQRNFVLYVEALEELVPLFFVLDHVNYARWTPIHIRD 64
Query: 40 MMQLQDSM 17
M+ L S+
Sbjct: 65 MISLPQSI 72
>SB_9577| Best HMM Match : Phage_tail_U (HMM E-Value=9.2)
Length = 217
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = -3
Query: 220 PTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQD 41
PT + W + L +RA+R ++ ++ ++E++P F H YA+ ++++D
Sbjct: 89 PTFRFWNAILHYQMLVLLVVRAQRQRNFVLYVEALEELVPLFFVLDHVNYARWTPIHIRD 148
Query: 40 MMQLQDSM 17
M L S+
Sbjct: 149 MKSLPQSI 156
>SB_17898| Best HMM Match : Entericidin (HMM E-Value=4.3)
Length = 532
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 586 IIVRLGGFHLLMSYLGAIGYIMQGSG 509
+IVRLG H+LMS++ AIG +MQ SG
Sbjct: 126 VIVRLGVMHMLMSFVDAIGTLMQDSG 151
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 112 EMLPYFHSSGHFPYAKSAHLYLQDM 38
E++PYF +S H YA+ YL+ M
Sbjct: 176 EIMPYFFASSHVNYARYGLYYLRSM 200
>SB_17226| Best HMM Match : zf-UBR1 (HMM E-Value=5.8)
Length = 308
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -3
Query: 256 INMKLKDFEERG---PTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHS 89
I KL +F++ P Q++ QY MV F+RA R DW HL +++ Y+ S
Sbjct: 104 IMSKLDEFDKEHANTPMFQVFYQYKTMVLEMMMFVRAVRTADWLLHLQAIEKFTKYYFS 162
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = -3
Query: 220 PTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQD 41
PT + W + L +RA+R ++ ++ ++E++P F H YA+ ++++D
Sbjct: 234 PTFRFWNVILHYQMLVLLVVRAQRQRNFVLYVEALEELVPLFFVLDHVNYARWTPIHIRD 293
Query: 40 MMQLQDSM 17
M L S+
Sbjct: 294 MKSLPQSI 301
>SB_28042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 586 IIVRLGGFHLLMSYLGAIGYIMQGSG 509
+IVRLG H+LMS++ AIG +MQ SG
Sbjct: 106 VIVRLGLMHMLMSFVDAIGTLMQDSG 131
>SB_56468| Best HMM Match : Bundlin (HMM E-Value=8.7)
Length = 496
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -3
Query: 220 PTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQD 41
PT + W + L +RA+R ++ ++ ++E++P F H YA+ ++ +D
Sbjct: 368 PTFRFWNAILHYQMLVLLVVRAQRQRNFVLYVEALEELVPLFFVLDHVNYARWTPIHFRD 427
Query: 40 MMQLQDSM 17
M L S+
Sbjct: 428 MKSLPQSI 435
>SB_10274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 844
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -3
Query: 193 FNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQ 26
F+ + LA +R+ R DW HL+ +++M+P+ + + YA+ Y +M L+
Sbjct: 564 FHEILLA--LVRSSRESDWALHLTAIRDMIPWCFAYDNVNYARYLSSYPSEMSHLE 617
>SB_26427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -3
Query: 130 HLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDPEVY 2
HL V +MLPY +S + Y SA LY Q M L+ P+VY
Sbjct: 2 HLQVVSQMLPYLAASENNHYTWSASLYQQSMKNLRVDR-PDVY 43
>SB_23936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 598 EVSKIIVRLGGFHLLMSYLGAIGYIMQGSG 509
E++ ++RLGGFH+ ++ L +G GSG
Sbjct: 36 EIANTVIRLGGFHIALNVLSLLGKKFAGSG 65
>SB_40157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = -3
Query: 163 LRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSM 17
+RA+R ++ ++ +++++P F H YA+ ++++DM L S+
Sbjct: 28 VRAQRQRNFVLYVEALEKLVPLFFVLDHVNYARWTPIHIRDMKSLPQSI 76
>SB_28799| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 710
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 598 EVSKIIVRLGGFHLLMSYLGAIGYIMQGSG 509
E + ++RLGGFH+ +++L +G SG
Sbjct: 549 EFANTVIRLGGFHIALNFLSLLGKKFASSG 578
>SB_50941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 265 TS*INMKLKDFEERGPTA--QLWIQYFNMVSLAKEFLRAERMGDWKAHLS 122
T ++ L+ F+E + + W MV L +F+ A+R G+W+ HL+
Sbjct: 264 TQDVDTLLRRFKESKSSKLFRFWDDNIKMVLLLLKFISAKRKGNWQLHLA 313
>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
Length = 1080
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 598 EVSKIIVRLGGFHLLMSYLGAIGYIMQGSG 509
E + ++R GGFH+ +++L +G SG
Sbjct: 612 EFANTVIRFGGFHIALNFLSLLGKKFASSG 641
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 157 AERMGDWKAHLSC-VKEMLPYFHSSGHFPY 71
AE++ WK +KE P F+ +G FPY
Sbjct: 93 AEKIRKWKTSTELEIKEKFPQFNKNGIFPY 122
>SB_6643| Best HMM Match : Antimicrobial_8 (HMM E-Value=0.27)
Length = 251
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +3
Query: 243 NFILIYEVKHLILHYHFQYLNMKECYLIY 329
+ I++YE +H + YH++ L++ ++Y
Sbjct: 156 HLIIVYERRHAVSGYHYKSLSVTHLIIVY 184
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +3
Query: 225 RSSKSFNFILIYEVKHLILHYHFQYLNMKECYLIY 329
+S + I++YE +H + YH++ L++ +Y
Sbjct: 81 KSLSVIHLIIVYERRHAVSGYHYESLSVTHLIRVY 115
>SB_41184| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=10)
Length = 252
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 575 TWRISSTHVLSRSNWLYYAR*RVKEVLSEI 486
TW+IS TH S W + ++K SE+
Sbjct: 121 TWQISRTHFRHTSTWFPQVKSKLKPQFSEV 150
>SB_25392| Best HMM Match : PHD (HMM E-Value=0.0062)
Length = 485
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 242 QFHINL*SKAPDTSLSFSISEYERVLSNIW 331
+FH+NL S P+ +L S Y +++S+ W
Sbjct: 65 KFHLNLLSTHPERTLRVSKDVYRKLVSSDW 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,467,591
Number of Sequences: 59808
Number of extensions: 343244
Number of successful extensions: 907
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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