Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120874.seq
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   3.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   4.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   4.5  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   7.9  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 501 FFYPLPCII*PIAPR*DMSR*NPPSLTIIFDTSE 602
           F Y LPCI+    P  D+S   PP+ T   D+SE
Sbjct: 351 FLYWLPCILRMSRPGRDLSMEYPPTPT--SDSSE 382


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 222 PRSSKSFNFILIYEVKHLILH 284
           P+S+     IL+  +KH ILH
Sbjct: 376 PKSNPPLEVILLQTIKHQILH 396


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 222 PRSSKSFNFILIYEVKHLILH 284
           P+S+     IL+  +KH ILH
Sbjct: 376 PKSNPPLEVILLQTIKHQILH 396


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 598 EVSKIIVRLGGFHLLMSYLGAIGYIMQGS 512
           E S+++     F    SY  A+G+++QGS
Sbjct: 632 ETSEMVKAPADFPKCDSYTPAVGHLLQGS 660


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,747
Number of Sequences: 2352
Number of extensions: 12766
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)