Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120874.seq
         (624 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.     33   0.41 
DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge spli...    33   0.41 
AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge prot...    33   0.41 
AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA...    33   0.41 

>U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.
          Length = 829

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 157 AERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDP 11
           AE MG  +           Y+HS  H P+A  AH +LQ  M L     P
Sbjct: 531 AEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPP 579


>DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge splice
           variant protein.
          Length = 705

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 157 AERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDP 11
           AE MG  +           Y+HS  H P+A  AH +LQ  M L     P
Sbjct: 407 AEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPP 455


>AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge
           protein.
          Length = 826

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 157 AERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDP 11
           AE MG  +           Y+HS  H P+A  AH +LQ  M L     P
Sbjct: 528 AEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPP 576


>AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA
           protein.
          Length = 826

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 157 AERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDP 11
           AE MG  +           Y+HS  H P+A  AH +LQ  M L     P
Sbjct: 528 AEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPP 576


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,862,693
Number of Sequences: 53049
Number of extensions: 513918
Number of successful extensions: 1343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)