Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120874.seq
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 122 LCKRNVTLFPLVRTFSIC*ICTLVFTRHDAIT 27
           LCK  +T   L  T SI  +C +   R+ AIT
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWAIT 139


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 122 LCKRNVTLFPLVRTFSIC*ICTLVFTRHDAIT 27
           LCK  +T   L  T SI  +C +   R+ AIT
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWAIT 139


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 122 LCKRNVTLFPLVRTFSIC*ICTLVFTRHDAIT 27
           LCK  +T   L  T SI  +C +   R+ AIT
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIALDRYWAIT 139


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -3

Query: 133 AHLSCVKEMLPYFHSSG--HFPYAKSAHLY 50
           A+   ++EMLPY+ SS   H P      LY
Sbjct: 232 AYYYYMREMLPYWMSSSQYHMPKEIRGQLY 261


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -3

Query: 133 AHLSCVKEMLPYFHSSG--HFPYAKSAHLY 50
           A+   ++EMLPY+ SS   H P      LY
Sbjct: 232 AYYYYMREMLPYWMSSSQYHMPKEIRGQLY 261


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 122 LCKRNVTLFPLVRTFSIC*ICTLVFTRHDAIT 27
           LC   V+L  L+ T SI  +C +   R+ A+T
Sbjct: 110 LCDSWVSLDILLCTASILSLCAISIDRYLAVT 141


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -3

Query: 169 EFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAK 65
           E L A R+G    + + +   LPY    G F   K
Sbjct: 579 EALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGK 613


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,223
Number of Sequences: 438
Number of extensions: 3096
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)