Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120873.seq
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TKD6 Cluster: Putative uncharacterized protein OSJNBa...    35   1.4  
UniRef50_A7S1M5 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.3  

>UniRef50_Q5TKD6 Cluster: Putative uncharacterized protein
           OSJNBa0017O06.13; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0017O06.13 - Oryza sativa subsp. japonica (Rice)
          Length = 244

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 275 EIIYFNCYLSQCFRIYNLLKDKW 343
           +I+YF CY+  C  I++LLK+ W
Sbjct: 16  QIVYFGCYMKICLAIFSLLKNMW 38


>UniRef50_A7S1M5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 152

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 60  CLS-SIVNVLRYLHLYVH*MCLAISVYSYTPIS 155
           CL+ SI  VL+Y+ +Y H +CL IS+Y    IS
Sbjct: 18  CLTISIYRVLQYVSIYRHILCLTISIYVCLTIS 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,365,962
Number of Sequences: 1657284
Number of extensions: 9877797
Number of successful extensions: 16696
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16693
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)