Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120871.seq
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.22 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 605 INHGFKFLDIKVCGAARPWSHY 540
           +  G++  D  VC  A+PWS+Y
Sbjct: 303 VGEGWQNTDFVVCFNAKPWSNY 324


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 431 YRRHSQRGLQQSGH*QHFSGHRIRLWVKSPNAASTSSNVTMDARHRKL 574
           ++  S  G   +GH +  S HRI +  +SP+  S   N  +     KL
Sbjct: 79  FKFSSSVGWSPAGHEEAQSPHRIYMHPESPSKGSHWMNQDISFSRVKL 126


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 614 WNTINHGFKFLDIKV 570
           W+++N  F+F+D K+
Sbjct: 46  WSSLNKNFQFIDKKL 60


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 453 GSNKVGTNSIFLGTVYD 503
           G+N++GT  IFL   +D
Sbjct: 492 GNNRMGTCRIFLAPQFD 508


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 384 GDNKLSQMYIAEKPLSIDDIV 446
           G  KLS+MY     LSI D++
Sbjct: 68  GRKKLSRMYFFILHLSIADLI 88


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 552 MVTLLDVLAAFGDLTHSRIRCPEK 481
           +V  +D  A+    TH RIR P+K
Sbjct: 640 LVATIDEAASDVHQTHMRIRPPKK 663


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 552 MVTLLDVLAAFGDLTHSRIRCPEK 481
           +V  +D  A+    TH RIR P+K
Sbjct: 640 LVATIDEAASDVHQTHMRIRPPKK 663


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 552 MVTLLDVLAAFGDLTHSRIRCPEK 481
           +V  +D  A+    TH RIR P+K
Sbjct: 640 LVATIDEAASDVHQTHMRIRPPKK 663


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 552 MVTLLDVLAAFGDLTHSRIRCPEK 481
           +V  +D  A+    TH RIR P+K
Sbjct: 640 LVATIDEAASDVHQTHMRIRPPKK 663


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,212
Number of Sequences: 336
Number of extensions: 3029
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)