Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120871.seq
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor ...    33   1.1  
X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.    33   1.1  
BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.         33   1.1  
BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.         33   1.1  
AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2 pro...    33   1.1  
BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal...    30   7.7  
AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.      30   7.7  

>Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor 2
           protein.
          Length = 858

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = -3

Query: 319 SDSTDSLLCPKLGDASVKEFKLMHSSNRDKSVRAKRSITRFST*FVLIYNFNSNEI*VVQ 140
           S  TDSL+C     AS +  +   +  R      +R IT  ST   L Y  + N++  ++
Sbjct: 33  STLTDSLVCKAGIIASARAGETRFTDTRKDE--QERCITIKSTAISLFYELSENDLNFIK 90

Query: 139 MFQKYT*IIVFPIDGHGHNDFTAE 68
             +     ++  ID  GH DF++E
Sbjct: 91  QSKDGAGFLINLIDSPGHVDFSSE 114


>X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.
          Length = 858

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = -3

Query: 319 SDSTDSLLCPKLGDASVKEFKLMHSSNRDKSVRAKRSITRFST*FVLIYNFNSNEI*VVQ 140
           S  TDSL+C     AS +  +   +  R      +R IT  ST   L Y  + N++  ++
Sbjct: 33  STLTDSLVCKAGIIASARAGETRFTDTRKDE--QERCITIKSTAISLFYELSENDLNFIK 90

Query: 139 MFQKYT*IIVFPIDGHGHNDFTAE 68
             +     ++  ID  GH DF++E
Sbjct: 91  QSKDGAGFLINLIDSPGHVDFSSE 114


>BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.
          Length = 858

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = -3

Query: 319 SDSTDSLLCPKLGDASVKEFKLMHSSNRDKSVRAKRSITRFST*FVLIYNFNSNEI*VVQ 140
           S  TDSL+C     AS +  +   +  R      +R IT  ST   L Y  + N++  ++
Sbjct: 33  STLTDSLVCKAGIIASARAGETRFTDTRKDE--QERCITIKSTAISLFYELSENDLNFIK 90

Query: 139 MFQKYT*IIVFPIDGHGHNDFTAE 68
             +     ++  ID  GH DF++E
Sbjct: 91  QSKDGAGFLINLIDSPGHVDFSSE 114


>BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.
          Length = 583

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = -3

Query: 319 SDSTDSLLCPKLGDASVKEFKLMHSSNRDKSVRAKRSITRFST*FVLIYNFNSNEI*VVQ 140
           S  TDSL+C     AS +  +   +  R      +R IT  ST   L Y  + N++  ++
Sbjct: 33  STLTDSLVCKAGIIASARAGETRFTDTRKDE--QERCITIKSTAISLFYELSENDLNFIK 90

Query: 139 MFQKYT*IIVFPIDGHGHNDFTAE 68
             +     ++  ID  GH DF++E
Sbjct: 91  QSKDGAGFLINLIDSPGHVDFSSE 114


>AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2
           protein.
          Length = 858

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = -3

Query: 319 SDSTDSLLCPKLGDASVKEFKLMHSSNRDKSVRAKRSITRFST*FVLIYNFNSNEI*VVQ 140
           S  TDSL+C     AS +  +   +  R      +R IT  ST   L Y  + N++  ++
Sbjct: 33  STLTDSLVCKAGIIASARAGETRFTDTRKDE--QERCITIKSTAISLFYELSENDLNFIK 90

Query: 139 MFQKYT*IIVFPIDGHGHNDFTAE 68
             +     ++  ID  GH DF++E
Sbjct: 91  QSKDGAGFLINLIDSPGHVDFSSE 114


>BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal
           protein L48 protein.
          Length = 212

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 24/88 (27%), Positives = 40/88 (45%)
 Frame = +3

Query: 249 CINLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPL 428
           C+  N++ + + SL +   S E        + L+ +R    +  HG  K   +  AE+P 
Sbjct: 10  CLRNNTIFKQAFSLLRFRTSGEKPIYSVGGILLSISRPYKTKPTHGIGKYKHLIKAEEP- 68

Query: 429 SIDDIVKEGSNKVGTNSIFLGTVYDYGL 512
                 K+   KV   +I LGT Y+YG+
Sbjct: 69  ------KKKKGKVEVRAINLGTDYEYGV 90


>AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.
          Length = 212

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 24/88 (27%), Positives = 40/88 (45%)
 Frame = +3

Query: 249 CINLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPL 428
           C+  N++ + + SL +   S E        + L+ +R    +  HG  K   +  AE+P 
Sbjct: 10  CLRNNTIFKQAFSLLRFRTSGEKPIYSVGGILLSISRPYKTKPTHGIGKYKHLIKAEEP- 68

Query: 429 SIDDIVKEGSNKVGTNSIFLGTVYDYGL 512
                 K+   KV   +I LGT Y+YG+
Sbjct: 69  ------KKKKGKVEVRAINLGTDYEYGV 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,247,568
Number of Sequences: 237096
Number of extensions: 1726501
Number of successful extensions: 10936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10934
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)