Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120870.seq
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 216 4e-55
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 146 3e-34
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 143 3e-33
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 133 3e-30
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 133 4e-30
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 132 5e-30
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 132 6e-30
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 130 2e-29
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 128 1e-28
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 126 3e-28
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 126 4e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 122 7e-27
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 121 1e-26
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 120 3e-26
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 117 3e-25
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 111 1e-23
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 109 4e-23
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 107 2e-22
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 106 4e-22
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 104 1e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 104 2e-21
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 104 2e-21
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 104 2e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 102 8e-21
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 101 1e-20
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 100 3e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 97 4e-19
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 96 5e-19
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 96 7e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 95 9e-19
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 92 8e-18
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 90 3e-17
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 87 3e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 86 7e-16
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 85 2e-15
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 83 7e-15
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 82 9e-15
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 81 2e-14
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 81 2e-14
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 81 3e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 80 5e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 80 5e-14
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 79 8e-14
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 79 8e-14
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 79 1e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 78 1e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 78 1e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 78 2e-13
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 78 2e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 77 3e-13
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 77 3e-13
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 77 3e-13
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 77 4e-13
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 76 8e-13
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 75 1e-12
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 74 2e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 74 2e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 74 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 4e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 4e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 7e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 72 1e-11
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 71 3e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 70 5e-11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 69 9e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 69 9e-11
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 68 2e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 68 2e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 67 3e-10
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 66 6e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 66 6e-10
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 66 8e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 65 1e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 64 3e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 64 3e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 63 4e-09
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 63 4e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 1e-08
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 60 3e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 7e-08
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 59 7e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 59 9e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 58 1e-07
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 57 4e-07
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 56 5e-07
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 56 9e-07
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 55 1e-06
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 53 6e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 52 8e-06
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 50 3e-05
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 49 8e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 49 1e-04
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 48 2e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 5e-04
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 46 0.001
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 44 0.002
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 43 0.005
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.015
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 41 0.027
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 40 0.036
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.062
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.25
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 38 0.25
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.33
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 37 0.44
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.58
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 36 0.77
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 1.0
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.0
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 35 1.3
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.8
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 1.8
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.3
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 34 2.3
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 34 2.3
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 4.1
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 5.4
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 33 5.4
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 5.4
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 5.4
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 7.1
UniRef50_Q7VG68 Cluster: Putative uncharacterized protein; n=2; ... 32 9.4
UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI130... 32 9.4
UniRef50_Q5AVA5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 216 bits (527), Expect = 4e-55
Identities = 103/144 (71%), Positives = 112/144 (77%)
Frame = +2
Query: 8 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 187
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 188 NLCYTSNWVIRIHCLSSSYIHCSIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 367
NLCY SNW+I I+CLSSSYI+ S YFTSAT+IIAVPTGIKIF LAT HGTQIN
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQIN 126
Query: 368 YNPNIL*RLGFVFLFTVGGLTGVI 439
Y+P+IL LGFVFLFTVGGLTGVI
Sbjct: 127 YSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 146 bits (355), Expect = 3e-34
Identities = 73/116 (62%), Positives = 83/116 (71%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV
Sbjct: 210 MDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGV 269
Query: 437 ILANSSIDITLHDTYYVVAHFHXXXXXXXXXXXXXXXXXXXXXXXGLSLNSYILKI 604
+LANSSIDI LHDTYYVVAHFH G++LN++ LKI
Sbjct: 270 VLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKI 325
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/54 (59%), Positives = 35/54 (64%)
Frame = +3
Query: 93 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 254
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTV
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTV 208
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 143 bits (346), Expect = 3e-33
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANSS+DI LHDTYYVVAHFH
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFH 82
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 133 bits (322), Expect = 3e-30
Identities = 57/82 (69%), Positives = 73/82 (89%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG+
Sbjct: 297 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGI 356
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANSS+DI LHDTYYVVAHFH
Sbjct: 357 VLANSSLDIVLHDTYYVVAHFH 378
Score = 122 bits (294), Expect = 7e-27
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 212 DRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYM 271
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
FIV AHH+FTV
Sbjct: 272 GMVWAMMSIGFLGFIVWAHHMFTV 295
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 133 bits (321), Expect = 4e-30
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGI 121
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
ILANSS+DI LHDTYYVVAHFH
Sbjct: 122 ILANSSLDIVLHDTYYVVAHFH 143
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/59 (57%), Positives = 38/59 (64%)
Frame = +3
Query: 78 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 254
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTV
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTV 60
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 132 bits (320), Expect = 5e-30
Identities = 59/82 (71%), Positives = 71/82 (86%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG+
Sbjct: 297 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGI 356
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANSSIDI LHDTYYVVAHFH
Sbjct: 357 VLANSSIDIVLHDTYYVVAHFH 378
Score = 122 bits (293), Expect = 9e-27
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 212 DRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYM 271
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
FIV AHH+FTV
Sbjct: 272 GMVWAMMAIGLLGFIVWAHHMFTV 295
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 132 bits (319), Expect = 6e-30
Identities = 64/116 (55%), Positives = 78/116 (67%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG+
Sbjct: 297 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGI 356
Query: 437 ILANSSIDITLHDTYYVVAHFHXXXXXXXXXXXXXXXXXXXXXXXGLSLNSYILKI 604
+LANSS+DI LHDTYYVVAHFH G +LNS KI
Sbjct: 357 VLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKI 412
Score = 123 bits (296), Expect = 4e-27
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F
Sbjct: 212 DRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYM 271
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
FIV AHH+FTV
Sbjct: 272 GMVWAMMAIGLLGFIVWAHHMFTV 295
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 130 bits (315), Expect = 2e-29
Identities = 63/119 (52%), Positives = 78/119 (65%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV
Sbjct: 281 MDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGV 340
Query: 437 ILANSSIDITLHDTYYVVAHFHXXXXXXXXXXXXXXXXXXXXXXXGLSLNSYILKISIF 613
+L+NSS+D+ LHDTYY VAHFH GL +N Y LKI +
Sbjct: 341 VLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHFY 399
Score = 126 bits (303), Expect = 6e-28
Identities = 58/84 (69%), Positives = 63/84 (75%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF
Sbjct: 196 DRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGML 255
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
FIV AHH+FT+
Sbjct: 256 GMIYAMLTIGFLGFIVWAHHMFTI 279
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 128 bits (309), Expect = 1e-28
Identities = 56/82 (68%), Positives = 72/82 (87%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV
Sbjct: 297 LDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGV 356
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LAN+S+DI HDTYYVVAHFH
Sbjct: 357 VLANASLDIAFHDTYYVVAHFH 378
Score = 100 bits (240), Expect = 2e-20
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F
Sbjct: 213 DRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYL 271
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V +HH++TV
Sbjct: 272 GMVYAMCSIGILGFVVWSHHMYTV 295
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 126 bits (305), Expect = 3e-28
Identities = 55/82 (67%), Positives = 70/82 (85%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GGLTG+
Sbjct: 274 MDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTGI 333
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANSSID+ LHDTYYVVAHFH
Sbjct: 334 VLANSSIDVVLHDTYYVVAHFH 355
Score = 106 bits (254), Expect = 5e-22
Identities = 49/82 (59%), Positives = 57/82 (69%)
Frame = +3
Query: 9 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 188
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 189 XXXXXXXXXXXFIV*AHHIFTV 254
F+V AHH+FTV
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTV 272
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 126 bits (304), Expect = 4e-28
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG+
Sbjct: 299 LDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGI 358
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANS +DI LHDTYYVVAHFH
Sbjct: 359 VLANSGLDIALHDTYYVVAHFH 380
Score = 113 bits (272), Expect = 3e-24
Identities = 55/84 (65%), Positives = 59/84 (70%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F
Sbjct: 215 DRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYL 273
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V AHH+FTV
Sbjct: 274 GMVYAMISIGVLGFLVWAHHMFTV 297
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 122 bits (294), Expect = 7e-27
Identities = 55/82 (67%), Positives = 69/82 (84%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG+
Sbjct: 304 LDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGI 363
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANS +DI+LHDTYYVVAHFH
Sbjct: 364 VLANSGLDISLHDTYYVVAHFH 385
Score = 107 bits (257), Expect = 2e-22
Identities = 52/84 (61%), Positives = 58/84 (69%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F
Sbjct: 220 DRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYI 278
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
FIV AHH++TV
Sbjct: 279 GMVYAMVSIGVLGFIVWAHHMYTV 302
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 121 bits (292), Expect = 1e-26
Identities = 56/80 (70%), Positives = 66/80 (82%)
Frame = +2
Query: 263 IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIL 442
+ RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLTG++L
Sbjct: 300 VXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTGIVL 359
Query: 443 ANSSIDITLHDTYYVVAHFH 502
ANSS+DI LHDTYYVVAHFH
Sbjct: 360 ANSSLDIALHDTYYVVAHFH 379
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 120 bits (289), Expect = 3e-26
Identities = 56/84 (66%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGLT 430
+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLFT+GGLT
Sbjct: 262 MDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGLT 321
Query: 431 GVILANSSIDITLHDTYYVVAHFH 502
G++L+NSS+DI LHDTYYVVAHFH
Sbjct: 322 GIVLSNSSLDILLHDTYYVVAHFH 345
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFG 86
DR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 213 DRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 117 bits (281), Expect = 3e-25
Identities = 51/82 (62%), Positives = 68/82 (82%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV
Sbjct: 323 LDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGV 382
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LAN+S +I HDTYYVVAHFH
Sbjct: 383 VLANASENIAFHDTYYVVAHFH 404
Score = 99.5 bits (237), Expect = 5e-20
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 239 DRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYL 297
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
FIV +HH++TV
Sbjct: 298 GMVYAMMSIGLLGFIVWSHHMYTV 321
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 111 bits (267), Expect = 1e-23
Identities = 49/82 (59%), Positives = 65/82 (79%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV
Sbjct: 339 MSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGV 398
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LAN +D LHDTYYVVAHFH
Sbjct: 399 VLANGGVDDVLHDTYYVVAHFH 420
Score = 97.5 bits (232), Expect = 2e-19
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 255 DRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYL 313
Query: 183 XXXXXXXXXXXXXFIV*AHHIFT 251
F+V AHH+FT
Sbjct: 314 GMAYAMVAIGVVGFVVWAHHMFT 336
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 109 bits (263), Expect = 4e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 173
DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 213 DRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 92.7 bits (220), Expect = 6e-18
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +2
Query: 338 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFH
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFH 379
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 107 bits (258), Expect = 2e-22
Identities = 51/85 (60%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGL 427
+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V LFT+GGL
Sbjct: 300 LDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGL 359
Query: 428 TGVILANSSIDITLHDTYYVVAHFH 502
TGVILAN+++ LHD+YYVVAHFH
Sbjct: 360 TGVILANAALSTLLHDSYYVVAHFH 384
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K F
Sbjct: 215 DRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKI 274
Query: 183 XXXXXXXXXXXXXFIV*AHHIF 248
F+V HH+F
Sbjct: 275 GMSWASMGIAWMGFLVWGHHMF 296
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 106 bits (255), Expect = 4e-22
Identities = 49/84 (58%), Positives = 58/84 (69%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F
Sbjct: 212 DRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYL 270
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V +HH++ V
Sbjct: 271 GMVYAMFSIGILGFLVWSHHMYAV 294
Score = 104 bits (249), Expect = 2e-21
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGV
Sbjct: 296 LDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGV 355
Query: 437 ILANSSIDITLHDTYY 484
ILAN+S+D+ LHD Y
Sbjct: 356 ILANASLDVALHDLKY 371
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 104 bits (250), Expect = 1e-21
Identities = 60/115 (52%), Positives = 74/115 (64%), Gaps = 16/115 (13%)
Frame = +2
Query: 197 YTSNWVIRIHCLSSSY--IHCSIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 370
Y WV R + L+ + +D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I
Sbjct: 334 YNFVWVNRKYLLTILHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKM 393
Query: 371 NPNIL*RLGFVFLFTVGGL--------------TGVILANSSIDITLHDTYYVVA 493
P +L LGFVFLFT+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 394 TPVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 161
DRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 238 DRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 104 bits (249), Expect = 2e-21
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F
Sbjct: 216 DRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHV 274
Query: 183 XXXXXXXXXXXXXFIV*AHHIFT 251
FIV AHH++T
Sbjct: 275 PMIAAMLMIGLIGFIVWAHHMYT 297
Score = 102 bits (245), Expect = 6e-21
Identities = 47/83 (56%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTG 433
ID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG
Sbjct: 300 IDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITG 358
Query: 434 VILANSSIDITLHDTYYVVAHFH 502
+IL+N+ ID ++HDT+YVV HFH
Sbjct: 359 IILSNAGIDTSIHDTHYVVGHFH 381
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 104 bits (249), Expect = 2e-21
Identities = 47/82 (57%), Positives = 61/82 (74%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G+
Sbjct: 307 LDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGI 366
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
IL+ +S+DI LHDTYYVVAHFH
Sbjct: 367 ILSAASLDIILHDTYYVVAHFH 388
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 222 DRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQT 281
Query: 183 XXXXXXXXXXXXXFIV*AHHIFT 251
V HH++T
Sbjct: 282 SMTFASIWIAVLGTSVWGHHMYT 304
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 104 bits (249), Expect = 2e-21
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV
Sbjct: 314 LDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGV 373
Query: 437 ILANSSIDITLHDTYYVVA 493
++ANSS+DI HDTYYVVA
Sbjct: 374 VIANSSLDIMFHDTYYVVA 392
Score = 92.3 bits (219), Expect = 8e-18
Identities = 44/84 (52%), Positives = 54/84 (64%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKI 288
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F V +HH+FTV
Sbjct: 289 GMIYAMASIGFLGFCVWSHHMFTV 312
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 102 bits (244), Expect = 8e-21
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F
Sbjct: 318 DRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYL 376
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V AHH++TV
Sbjct: 377 PMVYALVAIGGLGFVVWAHHMYTV 400
Score = 95.9 bits (228), Expect = 7e-19
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = +2
Query: 272 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 451
+AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ +
Sbjct: 407 QAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQA 466
Query: 452 SIDITLHDTYYVVAHFH 502
+D HDTYYVVAHFH
Sbjct: 467 GVDRAYHDTYYVVAHFH 483
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 101 bits (242), Expect = 1e-20
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F
Sbjct: 213 DRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEI 271
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V +HH++ V
Sbjct: 272 SMVYAMASIGLLGFLVWSHHMYIV 295
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 379
+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 297 LDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 100 bits (239), Expect = 3e-20
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F
Sbjct: 213 DRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEI 271
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V +HH++ V
Sbjct: 272 SMVYAMASIGLLGFLVWSHHMYIV 295
Score = 99.1 bits (236), Expect = 7e-20
Identities = 46/73 (63%), Positives = 58/73 (79%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV
Sbjct: 297 LDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGV 356
Query: 437 ILANSSIDITLHD 475
+LAN+S+D+ HD
Sbjct: 357 VLANASLDVAFHD 369
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +2
Query: 260 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 424
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 96.7 bits (230), Expect = 4e-19
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGLT 430
+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT GG T
Sbjct: 6 LEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGTT 64
Query: 431 GVILANSSIDITLHDTYYVVAHFH 502
GVIL N +ID+ LHDTYYV+AHFH
Sbjct: 65 GVILGNGAIDVALHDTYYVIAHFH 88
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 96.3 bits (229), Expect = 5e-19
Identities = 43/84 (51%), Positives = 52/84 (61%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 302 DRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYY 361
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
+V HH+F V
Sbjct: 362 GLICAMASIVCLGSVVWGHHMFMV 385
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +2
Query: 269 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILA 445
T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFTVGG+TGV L+
Sbjct: 391 TGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALS 450
Query: 446 NSSIDITLHDTYYVVAHFHXXXXXXXXXXXXXXXXXXXXXXXGLSLNSYILK 601
S++DI HDT++VVAHFH G SLN Y+L+
Sbjct: 451 ASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQ 502
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 95.9 bits (228), Expect = 7e-19
Identities = 45/83 (54%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTG 433
+DIDTR+YFT+AT+IIAVPTGIKIF L+++ + + N ++ F+ F +GG +G
Sbjct: 280 LDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSG 339
Query: 434 VILANSSIDITLHDTYYVVAHFH 502
+IL+N+S+D LHDTYYVVAHFH
Sbjct: 340 IILSNASVDHYLHDTYYVVAHFH 362
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
D++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 196 DKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 95.5 bits (227), Expect = 9e-19
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTG 433
+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ FT GG TG
Sbjct: 302 LEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTG 361
Query: 434 VILANSSIDITLHDTYYVVAHFH 502
VIL N++ID+ LHDTYYV+AHFH
Sbjct: 362 VILGNAAIDVALHDTYYVIAHFH 384
Score = 85.8 bits (203), Expect = 7e-16
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 146
D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 218 DLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 92.3 bits (219), Expect = 8e-18
Identities = 44/84 (52%), Positives = 54/84 (64%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKI 288
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F V +HH+FTV
Sbjct: 289 GMIYAMASIGFLGFCVWSHHMFTV 312
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 90.2 bits (214), Expect = 3e-17
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 266 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFTVGGLTGVIL 442
DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT+GG TGV++
Sbjct: 13 DTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGTTGVVM 72
Query: 443 ANSSIDITLHDTYYVVAHFH 502
N+ +DI LHDTYY+VAHFH
Sbjct: 73 GNAGMDIALHDTYYIVAHFH 92
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 87.0 bits (206), Expect = 3e-16
Identities = 37/82 (45%), Positives = 59/82 (71%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG+
Sbjct: 54 LDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGL 112
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
+LANS +D+ +HD+YYVVAHFH
Sbjct: 113 VLANSEVDLVMHDSYYVVAHFH 134
Score = 32.3 bits (70), Expect = 9.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 96 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 254
VY++ILP FG++SH + G + + V AHH+FTV
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTV 52
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 85.8 bits (203), Expect = 7e-16
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +2
Query: 206 NWVIRIHCLSSSYIHCSIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNI 382
N +R+ L +SY+H YFT+ TI+IA+PTG KIF + T+ + I +
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLV 344
Query: 383 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
L + F+ F +GG TGV+L N+ ID+ LHDT YVV HFH
Sbjct: 345 LFTVLFIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFH 384
Score = 81.4 bits (192), Expect = 2e-14
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 146
DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 218 DRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +2
Query: 272 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 451
R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGLTGV++A+
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASV 371
Query: 452 SIDITLHDTYYVVAHFH 502
DI +HDTY+VV HFH
Sbjct: 372 PFDIHVHDTYFVVGHFH 388
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/78 (48%), Positives = 47/78 (60%)
Frame = +3
Query: 18 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 197
TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 228 TSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYS 286
Query: 198 XXXXXXXXFIV*AHHIFT 251
IV AHH+FT
Sbjct: 287 SLAISFLGLIVWAHHMFT 304
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG+TGV+LA ++
Sbjct: 311 AIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAA 370
Query: 455 IDITLHDTYYVVAHFH 502
D HDTY+VVAHFH
Sbjct: 371 ADYQFHDTYFVVAHFH 386
Score = 72.9 bits (171), Expect = 5e-12
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K F
Sbjct: 221 DRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYS 279
Query: 183 XXXXXXXXXXXXXFIV*AHHIFT 251
F+V HH+FT
Sbjct: 280 SMVFAIVLIGFLGFMVWVHHMFT 302
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 82.2 bits (194), Expect = 9e-15
Identities = 41/84 (48%), Positives = 51/84 (60%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F
Sbjct: 215 DRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTV 273
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
V AHH+F V
Sbjct: 274 AMIYSMILIAILGMFVWAHHMFVV 297
Score = 79.0 bits (186), Expect = 8e-14
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +G +TG+
Sbjct: 299 MDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGL 358
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
L+N IDI LHDTY+VV HFH
Sbjct: 359 FLSNVGIDIMLHDTYFVVGHFH 380
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 81.4 bits (192), Expect = 2e-14
Identities = 32/74 (43%), Positives = 53/74 (71%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GGL+G+ +A + +D
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVD 412
Query: 461 ITLHDTYYVVAHFH 502
I +HDTY++VAHFH
Sbjct: 413 IVIHDTYFIVAHFH 426
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +3
Query: 36 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 215
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAG 330
Query: 216 XXFIV*AHHIF 248
FIV HH+F
Sbjct: 331 LGFIVWGHHMF 341
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 81.0 bits (191), Expect = 2e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 110
DRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 185 DRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG+TG+IL N+++D
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMD 425
Query: 461 ITLHDTYYVVAHFH 502
I LHDTYYVVAHFH
Sbjct: 426 IQLHDTYYVVAHFH 439
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Frame = +3
Query: 3 DRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 152
DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +I+
Sbjct: 264 DRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-T 322
Query: 153 RGKKETFXXXXXXXXXXXXXXXXFIV*AHHIF 248
+K F FIV AHH+F
Sbjct: 323 NARKPIFGYKAMIGSILGIAVLSFIVWAHHMF 354
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 79.8 bits (188), Expect = 5e-14
Identities = 39/117 (33%), Positives = 63/117 (53%)
Frame = +2
Query: 266 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILA 445
+ A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG+TGV+LA
Sbjct: 344 NVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLA 403
Query: 446 NSSIDITLHDTYYVVAHFHXXXXXXXXXXXXXXXXXXXXXXXGLSLNSYILKISIFY 616
D LH++ +++AHFH G LN + K S ++
Sbjct: 404 VPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLGKASFWF 460
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F
Sbjct: 257 DRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHK 315
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V HH FT+
Sbjct: 316 SMIYASGAISVLGFMVWLHHFFTM 339
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A + D
Sbjct: 324 FSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSD 383
Query: 461 ITLHDTYYVVAHFH 502
HDTY+VVAHFH
Sbjct: 384 AQQHDTYFVVAHFH 397
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/84 (44%), Positives = 44/84 (52%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K F
Sbjct: 232 DRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYS 290
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F V +HH+FTV
Sbjct: 291 VMVFSTALIGFMGFTVWSHHMFTV 314
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 79.0 bits (186), Expect = 8e-14
Identities = 36/78 (46%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILAN 448
+F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV++A
Sbjct: 329 FFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVAL 387
Query: 449 SSIDITLHDTYYVVAHFH 502
ID +HDTY+VVAHFH
Sbjct: 388 VPIDFQVHDTYFVVAHFH 405
Score = 63.7 bits (148), Expect = 3e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
+R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 79.0 bits (186), Expect = 8e-14
Identities = 35/76 (46%), Positives = 54/76 (71%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++GV LA+
Sbjct: 320 AFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASPP 379
Query: 455 IDITLHDTYYVVAHFH 502
I++ D+YYVVAH H
Sbjct: 380 INVQQTDSYYVVAHMH 395
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 230 DRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYA 288
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V AHH+F V
Sbjct: 289 FVAYSGVAIGFLGFLVWAHHMFAV 312
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +2
Query: 194 CYTSNWVIRIHCLSSSYIHCSIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINY 370
C S V+ + +DID+R+YF+ AT II++PT +K+F + T G
Sbjct: 285 CIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRG 344
Query: 371 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
N + F+ F GG TG++L++ S+DI LHDTY+VV HFH
Sbjct: 345 NNSSWSFFSFLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFH 388
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/84 (45%), Positives = 51/84 (60%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F
Sbjct: 224 DRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGRE 280
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
+ V AHH+FTV
Sbjct: 281 GMMYCIISIGVVGYFVWAHHMFTV 304
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A I
Sbjct: 322 FFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPI 381
Query: 458 DITLHDTYYVVAHFH 502
D L DTY+VVAHFH
Sbjct: 382 DWQLTDTYFVVAHFH 396
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/84 (45%), Positives = 48/84 (57%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +K +
Sbjct: 231 DRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYT 289
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
+ V AHH+F V
Sbjct: 290 FVAASSVAIVLLGYGVWAHHMFAV 313
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.2 bits (184), Expect = 1e-13
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F
Sbjct: 267 DRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFK 324
Query: 183 XXXXXXXXXXXXXFIV*AHHIFT 251
F V AHH+FT
Sbjct: 325 FVVYSTLAIGVLSFGVWAHHMFT 347
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
ID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +GG+TGV
Sbjct: 350 IDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGV 409
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
LA ID+ LHDTYYVV HFH
Sbjct: 410 FLAVIPIDLILHDTYYVVGHFH 431
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/76 (46%), Positives = 54/76 (71%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGLTGV++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVP 377
Query: 455 IDITLHDTYYVVAHFH 502
D +HDTY+VVAHFH
Sbjct: 378 FDTQVHDTYFVVAHFH 393
Score = 70.1 bits (164), Expect = 4e-11
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 146
DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 228 DRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/75 (42%), Positives = 53/75 (70%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG+TGV+LA
Sbjct: 347 FFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGA 406
Query: 458 DITLHDTYYVVAHFH 502
D LH++ +V+AHFH
Sbjct: 407 DFVLHNSLFVIAHFH 421
Score = 62.9 bits (146), Expect = 6e-09
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 256 DRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHH 314
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F V HH FT+
Sbjct: 315 SMIYASGAIAVLGFAVWLHHFFTM 338
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +2
Query: 269 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 448
TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +GGLTG+ L
Sbjct: 256 TRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGM 315
Query: 449 SSIDITLHDTYYVVAHFH 502
+ID+ + D+ +VV HFH
Sbjct: 316 VAIDLGVSDSLFVVGHFH 333
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 168 DKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/75 (44%), Positives = 55/75 (73%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+GV++A+
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPF 384
Query: 458 DITLHDTYYVVAHFH 502
D+ HDTY+VVAHFH
Sbjct: 385 DMQAHDTYFVVAHFH 399
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 235 DRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 77.4 bits (182), Expect = 3e-13
Identities = 32/75 (42%), Positives = 55/75 (73%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL VGGLTG++LA +I
Sbjct: 366 FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAI 425
Query: 458 DITLHDTYYVVAHFH 502
+ T+H++ +VVAHFH
Sbjct: 426 NYTVHNSVFVVAHFH 440
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/84 (39%), Positives = 42/84 (50%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +K F
Sbjct: 275 DRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYA 333
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
+ V HH FT+
Sbjct: 334 TMVIATFAIGGISWGVWLHHFFTM 357
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 76.6 bits (180), Expect = 4e-13
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TGV+L+ + +D
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLD 373
Query: 461 ITLHDTYYVVAHFH 502
HD+Y+VVAHFH
Sbjct: 374 YQFHDSYFVVAHFH 387
Score = 65.7 bits (153), Expect = 8e-10
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
+R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 222 ERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYR 280
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
+V AHH+FTV
Sbjct: 281 QMVWAQMGIVVLGTMVWAHHMFTV 304
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 75.8 bits (178), Expect = 8e-13
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 260 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 439
D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F VGG+TGV
Sbjct: 307 DFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVF 366
Query: 440 LANSSIDITLHDTYYVVAHFH 502
++D+ LHDTY+V+ HFH
Sbjct: 367 FPVITLDLHLHDTYFVLGHFH 387
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 DRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 167
+R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I Q ++
Sbjct: 217 ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRR 275
Query: 168 TFXXXXXXXXXXXXXXXXFIV*AHHIFTVV 257
+ F V HH+FT V
Sbjct: 276 AYGYTAIAISSVAIASISFAVWMHHMFTAV 305
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +2
Query: 293 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 472
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLS 368
Query: 473 DTYYVVAHFH 502
+TYYVV HFH
Sbjct: 369 ETYYVVGHFH 378
Score = 55.2 bits (127), Expect = 1e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 146
D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 212 DKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 74.1 bits (174), Expect = 2e-12
Identities = 31/76 (40%), Positives = 54/76 (71%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN
Sbjct: 366 AVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPI 425
Query: 455 IDITLHDTYYVVAHFH 502
+D +H+T ++VAHFH
Sbjct: 426 LDYQVHNTVFLVAHFH 441
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 276 DRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYK 334
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V HH FT+
Sbjct: 335 SLVWATISIAFLSFLVWLHHFFTM 358
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 74.1 bits (174), Expect = 2e-12
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Frame = +3
Query: 3 DRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 152
DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS
Sbjct: 242 DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-T 300
Query: 153 RGKKETFXXXXXXXXXXXXXXXXFIV*AHHIF 248
+K F F+V AHH++
Sbjct: 301 HARKNIFGYRMMVWAIVAIGALSFVVWAHHMY 332
Score = 73.3 bits (172), Expect = 4e-12
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F + T+IIA+PT IK++ + T+ I+ +L LGF+ F GGLTG+ L N +
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVV 402
Query: 458 DITLHDTYYVVAHFH 502
D+ L DT +VVAHFH
Sbjct: 403 DVPLSDTMFVVAHFH 417
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F +T++IA+P+ IK F ATI G ++ +N L + F+ +F VGGL+G+ +A +D
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVD 415
Query: 461 ITLHDTYYVVAHFH 502
+ HDTY++VAHFH
Sbjct: 416 VYFHDTYFIVAHFH 429
Score = 58.8 bits (136), Expect = 9e-08
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +3
Query: 39 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 218
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 219 XFIV*AHHIFT 251
FIV HH+FT
Sbjct: 335 GFIVWGHHMFT 345
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 65 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 235
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F
Sbjct: 299 DRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFK 355
Query: 183 XXXXXXXXXXXXXFIV*AHHIF 248
F V AHH+F
Sbjct: 356 FVVYSTLAIGVLSFGVWAHHMF 377
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG+TGV
Sbjct: 381 LDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGV 440
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
LA+ +D+ LH TYYVV HFH
Sbjct: 441 FLASIPVDLVLHATYYVVGHFH 462
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/76 (40%), Positives = 54/76 (71%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG+TGV+LA ++
Sbjct: 342 SFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAA 401
Query: 455 IDITLHDTYYVVAHFH 502
D H+TY++V+HFH
Sbjct: 402 ADYQYHNTYFLVSHFH 417
Score = 65.7 bits (153), Expect = 8e-10
Identities = 35/84 (41%), Positives = 44/84 (52%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F
Sbjct: 252 DRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYK 310
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V HH FT+
Sbjct: 311 AMVGSIIAISVLSFLVWTHHFFTM 334
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 72.5 bits (170), Expect = 7e-12
Identities = 35/82 (42%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 238 DLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYR 296
Query: 183 XXXXXXXXXXXXXFIV*AHHIF 248
IV AHH+F
Sbjct: 297 FVAIASFGITFLSLIVWAHHMF 318
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +2
Query: 272 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 451
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATV 386
Query: 452 SIDITLHDTYYVVAHFH 502
IDI + +TY+VVAHFH
Sbjct: 387 PIDIHVGNTYFVVAHFH 403
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 164
DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 373 DRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR 426
Score = 63.7 bits (148), Expect = 3e-09
Identities = 28/82 (34%), Positives = 52/82 (63%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 436
+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V G TG+
Sbjct: 457 LDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTGM 516
Query: 437 ILANSSIDITLHDTYYVVAHFH 502
L++ S+++++HDT+YVVAHFH
Sbjct: 517 WLSHVSLNVSMHDTFYVVAHFH 538
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 70.5 bits (165), Expect = 3e-11
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 98
DRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 209 DRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 324 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 425
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 69.7 bits (163), Expect = 5e-11
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +3
Query: 27 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 206
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLG 304
Query: 207 XXXXXFIV*AHHIF 248
F HH+F
Sbjct: 305 IAFVGFFAWGHHMF 318
Score = 66.1 bits (154), Expect = 6e-10
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F T+I+ V T IK+F + T++ + + GF+F GG+TG+ L S+D
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLD 389
Query: 461 ITLHDTYYVVAHFH 502
+ HDTY+VVAHFH
Sbjct: 390 VAWHDTYFVVAHFH 403
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 68.9 bits (161), Expect = 9e-11
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG+TGV L D
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMIPFD 381
Query: 461 ITLHDTYYVVAHFH 502
+ +YYVVAHFH
Sbjct: 382 YQVTMSYYVVAHFH 395
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +3
Query: 12 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 191
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMV 291
Query: 192 XXXXXXXXXXFIV*AHHIFTV 254
IV HH+F V
Sbjct: 292 YSMLAIVLVSCIVWLHHMFAV 312
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 68.9 bits (161), Expect = 9e-11
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGLTG++LA+ +
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPL 385
Query: 458 DITLHDTYYVVAHFH 502
D L D+Y+++AHFH
Sbjct: 386 DFHLADSYFLIAHFH 400
Score = 67.7 bits (158), Expect = 2e-10
Identities = 37/82 (45%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 238 DRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYV 295
Query: 183 XXXXXXXXXXXXXFIV*AHHIF 248
V AHH+F
Sbjct: 296 GLIFATLSIGALSMAVWAHHMF 317
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F+ T+II +P + L +++G+++ N L LGF+ +F GG++G LA SID
Sbjct: 352 FSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSID 411
Query: 461 ITLHDTYYVVAHFH 502
I LH TY+VV HFH
Sbjct: 412 IYLHATYFVVGHFH 425
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = +3
Query: 33 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 212
P GGG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIG 328
Query: 213 XXXFIV*AHHIF 248
++V HH+F
Sbjct: 329 FLSYVVWGHHMF 340
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
+R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYT 268
Query: 183 XXXXXXXXXXXXXFI-V*AHHIFTVV 257
+ V HH+FT +
Sbjct: 269 AIALSSIAIAFLSALGVWMHHMFTAI 294
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +2
Query: 284 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 463
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 464 TLHDTYYVVAHFH 502
L+ TY+VV HFH
Sbjct: 364 ALNGTYFVVGHFH 376
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/74 (40%), Positives = 51/74 (68%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG+TGV++A +
Sbjct: 346 FSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFN 405
Query: 461 ITLHDTYYVVAHFH 502
+ HD+Y+VVAH H
Sbjct: 406 LQAHDSYFVVAHLH 419
Score = 62.9 bits (146), Expect = 6e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
+R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F
Sbjct: 254 ERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYG 312
Query: 183 XXXXXXXXXXXXXFIV*AHHIF 248
F + AHH+F
Sbjct: 313 FAVAAVVTMSFLSFGLWAHHMF 334
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/74 (40%), Positives = 48/74 (64%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 461 ITLHDTYYVVAHFH 502
+ LHDT +VV HFH
Sbjct: 402 LYLHDTMFVVGHFH 415
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Frame = +3
Query: 3 DRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 146
DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 245 DRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 66.1 bits (154), Expect = 6e-10
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 179
DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS G K +
Sbjct: 221 DRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAK 277
Query: 180 XXXXXXXXXXXXXXFIV*AHHIF 248
F+V HH+F
Sbjct: 278 RYILTAFLIATIISFVVWMHHMF 300
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 260 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 439
+I TR +++ TI+I++P + + + T++ ++ Y +L +G + F +GG TGV
Sbjct: 305 NIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTGVY 364
Query: 440 LANSSIDITLHDTYYVVAHFH 502
L + +ID TY+VVAHFH
Sbjct: 365 LGSIAIDRGFRGTYWVVAHFH 385
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 65.7 bits (153), Expect = 8e-10
Identities = 27/75 (36%), Positives = 50/75 (66%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG +GVIL+ ++
Sbjct: 342 FFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNL 401
Query: 458 DITLHDTYYVVAHFH 502
D H++ +++AHFH
Sbjct: 402 DFIFHNSMFLIAHFH 416
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/84 (42%), Positives = 43/84 (51%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 251 DRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYI 309
Query: 183 XXXXXXXXXXXXXFIV*AHHIFTV 254
F+V HH FT+
Sbjct: 310 SLIYATISITVLSFLVWLHHFFTM 333
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +3
Query: 27 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 206
FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLG 297
Query: 207 XXXXXFIV*AHHIFT 251
F HH+FT
Sbjct: 298 IAFVGFFTWGHHMFT 312
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F ++ + + T IK+F AT++ I + GF+F GG+TG+ LA S+D
Sbjct: 323 FGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLD 382
Query: 461 ITLHDTYYVVAHFH 502
+ HDTY++VAHFH
Sbjct: 383 VHWHDTYFIVAHFH 396
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
+F++A+ + +PTGI++F +AT+ ++ +L G + +FT GGLTGV++A +
Sbjct: 345 FFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVAIAPF 404
Query: 458 DITLHDTYYVVAHFH 502
D +HDTY++VAH H
Sbjct: 405 DWQVHDTYFIVAHLH 419
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/76 (39%), Positives = 49/76 (64%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
A+F +A+++I++P+ + +F +ATI + + L GFV +F VGG++GV+ A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVP 397
Query: 455 IDITLHDTYYVVAHFH 502
+D L DTY+VVAH H
Sbjct: 398 LDWQLTDTYFVVAHLH 413
Score = 62.9 bits (146), Expect = 6e-09
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 134
DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 248 DRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 454
A+F++A+ ++AVPT +++F + T+ + +L L F F +GGLTGV++A
Sbjct: 318 AFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVP 377
Query: 455 IDITLHDTYYVVAHFH 502
D +HDTY++VAH H
Sbjct: 378 FDWQVHDTYFIVAHLH 393
Score = 59.7 bits (138), Expect = 5e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
+R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 228 ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 63.3 bits (147), Expect = 4e-09
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGH 89
DRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 131 DRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 60.1 bits (139), Expect = 4e-08
Identities = 36/75 (48%), Positives = 39/75 (52%)
Frame = +2
Query: 278 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 457
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 458 DITLHDTYYVVAHFH 502
DI LHDTYYVVAH H
Sbjct: 282 DIILHDTYYVVAHXH 296
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLFTVGGLTGVIL 442
++F +A+ +A+P+G+++F +AT + I L LGF+F+F +GGLTGV++
Sbjct: 387 SFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVMV 446
Query: 443 ANSSIDITLHDTYYVVAHFH 502
A D HD+Y++VAH H
Sbjct: 447 AVIPFDWQAHDSYFIVAHLH 466
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 143
+R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 297 ERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +2
Query: 281 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 460
F + T +++PTG + TI G ++ N +L L + F +GGLTG+ A+ D
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPAD 455
Query: 461 ITLHDTYYVVAHFH 502
+ LH+TY+V+AHFH
Sbjct: 456 LQLHNTYWVIAHFH 469
Score = 38.3 bits (85), Expect = 0.14
Identities = 25/79 (31%), Positives = 30/79 (37%)
Frame = +3
Query: 21 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 200
S F G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGL 369
Query: 201 XXXXXXXFIV*AHHIFTVV 257
+ HH FT V
Sbjct: 370 VGVSMSGAMSGVHHYFTAV 388
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 59.3 bits (137), Expect = 7e-08
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 451
A F++A+ ++AVPT +++F + T+ GT P ++ L F F +GGLTGV++A
Sbjct: 318 ALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVV 376
Query: 452 SIDITLHDTYYVVAHFH 502
D +HDT+++VAH H
Sbjct: 377 PFDWQVHDTHFIVAHLH 393
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/83 (38%), Positives = 40/83 (48%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
+R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 228 ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYR 286
Query: 183 XXXXXXXXXXXXXFIV*AHHIFT 251
F + HH+FT
Sbjct: 287 WVVAAAISLAVLSFGLWVHHMFT 309
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 59.3 bits (137), Expect = 7e-08
Identities = 34/124 (27%), Positives = 63/124 (50%)
Frame = +2
Query: 131 FSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYIHCSIDIDTRAYFTSATIIIAV 310
F + R+ R +++ L ++V+ +H + + I++ + F + TI I++
Sbjct: 280 FQTFTGRRLVGRKWFIISMVLVALQSFVVWMHHMFLT----GINLPIKTIFMATTIGISL 335
Query: 311 PTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 490
P + +F + T+ ++ + L LG + LF +GG+TGV L +D TY+VV
Sbjct: 336 PFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFLGAIVLDYQFRGTYWVV 395
Query: 491 AHFH 502
AHFH
Sbjct: 396 AHFH 399
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 30 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXX 209
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLV 301
Query: 210 XXXXFIV*AHHIF 248
F+V HH+F
Sbjct: 302 ALQSFVVWMHHMF 314
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.8 bits (136), Expect = 9e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 113
DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 218 DRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 182
DR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ + +K +
Sbjct: 214 DRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYN 272
Query: 183 XXXXXXXXXXXXXFIV*AHHIF 248
F AHH+F
Sbjct: 273 SGLFAFVLLTIVGFSSWAHHMF 294
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 272 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 451
+ F T+ + + +F +AT+ +I ++ ++ +G + LF G GV+ A
Sbjct: 303 KTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAM 362
Query: 452 SIDITLHDTYYVVAHFH 502
+D T HDTY+VV HFH
Sbjct: 363 PLDFTTHDTYWVVGHFH 379
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 113
DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 213 DRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF 74
DRN NTSFFDPAGGGDPILYQHLF
Sbjct: 195 DRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 55.6 bits (128), Expect = 9e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFG 86
DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 213 DRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF 74
DRN NTSF+DPAGGGDPILYQHLF
Sbjct: 212 DRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 52.8 bits (121), Expect = 6e-06
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 113
DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 52.4 bits (120), Expect = 8e-06
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +2
Query: 293 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 472
T I++PT + I +AT+ G + + IL L F +GG++GV ++ +ID +H
Sbjct: 337 TETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVH 396
Query: 473 DTYYVVAHFH 502
YYVVAHFH
Sbjct: 397 GDYYVVAHFH 406
Score = 42.7 bits (96), Expect = 0.007
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 45 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 146
G +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 263 IDTRAYFTSATIIIAVPTGIKIFR*LAT 346
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/59 (42%), Positives = 29/59 (49%)
Frame = +3
Query: 78 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 254
FFGHPEVY+LILP FGI+SHI F +V AHH+F V
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMV 59
Score = 36.7 bits (81), Expect = 0.44
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 260 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 355
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 62 DVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIF 331
+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 6 MDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 260 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFTVGGLTG 433
D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT+GG G
Sbjct: 38 DVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMGGRQG 96
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +2
Query: 140 YFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYIHCSIDIDTRAYFTSATIIIAVPTG 319
Y K FW +CY N + +D++T +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
Query: 320 IKIFR*LATIHGTQINYNPNIL 385
IK+F L + +++N IL
Sbjct: 81 IKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 65 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 244
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 245 IH 250
+H
Sbjct: 61 VH 62
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 128
DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVG 421
+ +D RA+ T +T+++A +G+ + TI T Y+ LG FL F +G
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIG 117
Query: 422 GLTGVILANSSIDITLHDTYYVVAHFH 502
G+ + L + I+ +H+TYYVV HFH
Sbjct: 118 GVQALPLPINIINGVVHNTYYVVGHFH 144
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 73 NKC*YKIGSPPPAGSKNDVFKFRS 2
NKC + IGSPPPAGSK +VFKFRS
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRS 23
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.015
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +2
Query: 407 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 48 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 161
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 40.7 bits (91), Expect = 0.027
Identities = 27/104 (25%), Positives = 52/104 (50%)
Frame = +2
Query: 191 LCYTSNWVIRIHCLSSSYIHCSIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 370
L +N ++ +H L Y++ + +T+ I++ + + +F LA + + I
Sbjct: 302 LATVTNLLVWVHHL---YLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKM 358
Query: 371 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
P + L +F + G +GV A + ++ LH+T +VVAHFH
Sbjct: 359 TPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVAHFH 402
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 40.3 bits (90), Expect = 0.036
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 3 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 113
DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 45 DRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 401 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.25
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 401 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 37.5 bits (83), Expect = 0.25
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGL 427
+ I R + +T+I+A +G+ + TI T Y+ P + L + F + G
Sbjct: 291 LPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIGFILAGA 349
Query: 428 TGVILANSSIDITLHDTYYVVAHFH 502
++L +SI+ H++YYVV HFH
Sbjct: 350 QALVLPENSINPLFHNSYYVVGHFH 374
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 54 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 161
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.1 bits (82), Expect = 0.33
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 275 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 430
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 431 GVILANSSIDITLHDTYYVVAHFH 502
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 36.7 bits (81), Expect = 0.44
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 293 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 472
T + +P+ + F AT G + +N + G+TG+ A S D +H
Sbjct: 316 TYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAGVTGISNATISFDAIVH 375
Query: 473 DTYYVVAHFH 502
+T +VV HFH
Sbjct: 376 NTDWVVGHFH 385
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.58
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 392 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 35.9 bits (79), Expect = 0.77
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 8 KLKYIIF*SCWRRRPNFISTFILIFWT 88
K KY IF W P +STFILIFWT
Sbjct: 126 KSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 1.0
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 371 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 42 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 158
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 401 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 371 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFH 502
NP +L L F F+ GG G+I + +D T+H+T ++ HFH
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFH 368
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 90 PEVYILILPGFGIISHIISQERGKK 164
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 1.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 407 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 401 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 371 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
NP +L + + + +GG G++ A+ +++ +H+T +V HFH
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFH 370
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 34.3 bits (75), Expect = 2.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 328 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 450
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.5 bits (73), Expect = 4.1
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +2
Query: 5 SKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFR 184
SKL++I+ S PN I ILI T L+ N T I ++ +K N ++
Sbjct: 117 SKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHLHNIFSQKSNILYYK 176
Query: 185 NNLCYTSNW 211
NNL ++ W
Sbjct: 177 NNLRHSIYW 185
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 5.4
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +2
Query: 41 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 220
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 221 IHCLSSS 241
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 33.1 bits (72), Expect = 5.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 434 VILANSSIDITLHDTYYVVAHFH 502
+ L+ D T HDTYYVVAH H
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIH 51
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 5.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 68 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 241
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 242 YIH 250
+H
Sbjct: 618 NVH 620
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 5.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 407 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 7.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 410 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 502
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
>UniRef50_Q7VG68 Cluster: Putative uncharacterized protein; n=2;
Helicobacter hepaticus|Rep: Putative uncharacterized
protein - Helicobacter hepaticus
Length = 239
Score = 32.3 bits (70), Expect = 9.4
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 110 FTRIWYNFSYYFTRKRKKRNFWL-FRNNLCYTSNWVIRIHCLSSSYIH 250
F ++WY +Y K + F++ + ++ YT +WVIRI+ +++ Y H
Sbjct: 127 FLKLWYQHRFY---KYGEFGFYVNWVSSAIYTGSWVIRINDINTQYRH 171
>UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI1305w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI1305w - Plasmodium falciparum
(isolate 3D7)
Length = 1327
Score = 32.3 bits (70), Expect = 9.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 110 FTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYI 247
F IW ++ + KK +W N++ YTS W I YI
Sbjct: 1045 FNIIWIKIKTWYKKIDKKEKYWKRYNDILYTSQWKNNIQDNELEYI 1090
>UniRef50_Q5AVA5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 369
Score = 32.3 bits (70), Expect = 9.4
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 119 IWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYIHCSIDIDTRAYFTSATI 298
I+ NF Y F R FW+F +L YT W++R SSY +D+ Y +
Sbjct: 53 IYQNFRYRFWRI----TFWMFWGSLLYTVGWILR---AISSYSPEHVDL----YIAATVF 101
Query: 299 IIAVP 313
+ A P
Sbjct: 102 VYAAP 106
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,551,354
Number of Sequences: 1657284
Number of extensions: 6692204
Number of successful extensions: 14373
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 13911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14324
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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