Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120865.seq
(622 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 121 1e-26
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 106 4e-22
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 104 1e-21
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 73 4e-12
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 73 7e-12
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 72 1e-11
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 69 7e-11
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 66 5e-10
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 1e-05
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 52 1e-05
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 52 1e-05
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 49 4e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 50 4e-05
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 39 0.084
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 37 0.45
UniRef50_Q8VHD8 Cluster: Hornerin; n=6; Mus musculus|Rep: Horner... 34 2.4
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 121 bits (292), Expect = 1e-26
Identities = 56/79 (70%), Positives = 60/79 (75%)
Frame = -2
Query: 492 TYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSH 313
TYGKPKSHGVNQLKP R LQSIAEE L+SYW+AQD+SYKYFEVIL+D H
Sbjct: 80 TYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHH 139
Query: 312 KAIRRDPKINWIVNAVHKH 256
AIRRDPKINWI VHKH
Sbjct: 140 SAIRRDPKINWICKHVHKH 158
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -1
Query: 253 EMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 119
E+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 160 ELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 106 bits (255), Expect = 4e-22
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = -2
Query: 558 YVVLRIRVPTWXPASVHCLRVPTYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLS 379
YV+ RIRV + TYGKP HGVNQLK R+LQS+AEE L+
Sbjct: 59 YVIYRIRVRRGGRKRP-VPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLN 117
Query: 378 SYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKH 256
SYWV +DS+YK+FEVIL+DP HKAIRR+P WI VHKH
Sbjct: 118 SYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKH 158
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = -1
Query: 253 EMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 119
EMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 160 EMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 104 bits (250), Expect = 1e-21
Identities = 49/101 (48%), Positives = 66/101 (65%)
Frame = -2
Query: 558 YVVLRIRVPTWXPASVHCLRVPTYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLS 379
+VV R+RV C + TYGKPK+HGVN+LK ++ Q++AE L+
Sbjct: 59 FVVYRVRVRRGNRKRPVC-KGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLN 117
Query: 378 SYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKH 256
SYWVA+DS+YK++EV+L+DP HKAIRR+P WI VHKH
Sbjct: 118 SYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKH 158
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = -1
Query: 253 EMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 119
E RGLTSAGR SRGLGKG R+S T+GGS+ W R+NT RKR
Sbjct: 160 EQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = -2
Query: 483 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 304
+ K GVN++ +NLQ IAEE L+SYWV +D S K+FE IL+DP H AI
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142
Query: 303 RRDPKINWIVNAVHKH 256
+ D +NWI + HK+
Sbjct: 143 QNDDDLNWICDDSHKN 158
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 72.5 bits (170), Expect = 7e-12
Identities = 35/75 (46%), Positives = 43/75 (57%)
Frame = -2
Query: 483 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 304
KP G + P ++LQ IAEE L+SYWV +D YK+FEVI+VDP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 303 RRDPKINWIVNAVHK 259
+ DPKI WI HK
Sbjct: 141 KSDPKIAWIALKHHK 155
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/102 (38%), Positives = 56/102 (54%)
Frame = -2
Query: 555 VVLRIRVPTWXPASVHCLRVPTYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSS 376
VV+R+RV + R T +PK GV + + NLQ +AE+ L S
Sbjct: 60 VVVRVRVRR---GPFNRRRPNTGRRPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGS 116
Query: 375 YWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHLR 250
YWV +D+ YK+FEV+++DPSH AIR DP W+V ++ R
Sbjct: 117 YWVGEDAMYKWFEVVMIDPSHPAIRNDPDYAWVVGKEYREGR 158
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 69.3 bits (162), Expect = 7e-11
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = -2
Query: 483 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 304
+PK GV P ++ + IAEE L+SYWVA+D Y+++EVILVDP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162
Query: 303 RRDPKINWIVNAVHK 259
DP++ WI H+
Sbjct: 163 CSDPELKWICEKQHR 177
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Frame = -2
Query: 558 YVVLRIRVPTWXPASVHCLRVPTYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLS 379
+V++R+RV ++ R + +PK GV P++ + IAEE L
Sbjct: 59 FVMVRVRVRR---GGLNKPRPNSGRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLG 115
Query: 378 SYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHK 259
SY+VA+D YKY+EVI+VD SH IR DP++ W+ ++V++
Sbjct: 116 SYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNR 155
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -2
Query: 483 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 304
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 303 RRDPKIN 283
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -2
Query: 501 RVPTYGK-PKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILV 325
R P G+ PK GV + ++ + +AEE L+SYWVA D Y+YFEVIL+
Sbjct: 76 RRPDSGRRPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILI 135
Query: 324 DPSHKAIRRDP 292
D + I+ DP
Sbjct: 136 DCNLPTIKNDP 146
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/96 (33%), Positives = 50/96 (52%)
Frame = -2
Query: 555 VVLRIRVPTWXPASVHCLRVPTYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSS 376
VV+R+RV T + R +PK GV ++K +++ +A L S
Sbjct: 57 VVVRMRVGT---GGMRRQRPRGGRRPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGS 113
Query: 375 YWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNA 268
Y+V +D +Y +FEVIL DPSH + +DP++ V A
Sbjct: 114 YFVYKDGAYYWFEVILADPSHPRVAKDPELRDRVGA 149
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 49.2 bits (112), Expect = 8e-05
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -1
Query: 253 EMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 119
E+ GLTSAG RGL GKGH + + + S RA W R T+ LRR R
Sbjct: 393 ELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438
Score = 44.8 bits (101), Expect(2) = 4e-05
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2
Query: 342 FEVILVDPSHKAIRRDPKINWIVNAVHKH 256
FE+ILVD +H AIR D +INW+ VHKH
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKH 391
Score = 25.0 bits (52), Expect(2) = 4e-05
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 489 YGKPKSHGVNQLKPTRN 439
Y KPK G+ QLK RN
Sbjct: 340 YSKPKHQGITQLKFQRN 356
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = -2
Query: 555 VVLRIRVPTWXPASVHCLRVPTYGK-PKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLS 379
+V+R+RV T PT G+ PK GV ++K N++++AE L
Sbjct: 96 IVVRMRVGTGGMRKQR----PTGGRRPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLG 151
Query: 378 SYWVAQDSSYKYFEVILVDPSHKAIRRDPKI 286
SY++ +D + +FEVIL DP H + +D ++
Sbjct: 152 SYFIYKDGKHYWFEVILADPDHPRVAQDKEL 182
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +1
Query: 277 DPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXXFLSNGLKVARGLQ 456
DP+ +R++++ + ++EDNL+ + I NPV Q FLSN LK + +Q
Sbjct: 31 DPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRLKASGKVQ 90
Query: 457 LVDTMALGLAIS 492
LV+T+ LAIS
Sbjct: 91 LVNTVVNRLAIS 102
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 39.1 bits (87), Expect = 0.084
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +1
Query: 256 MLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 372
+L++ + DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 470 VLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 36.7 bits (81), Expect = 0.45
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 277 DPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXXFLSNGLKVARGL 453
DP+ +RI+++ + ++EDNL + I NPVR Q L NGLK + L
Sbjct: 52 DPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLCNGLKASSKL 110
>UniRef50_Q8VHD8 Cluster: Hornerin; n=6; Mus musculus|Rep: Hornerin
- Mus musculus (Mouse)
Length = 2496
Score = 34.3 bits (75), Expect = 2.4
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -1
Query: 337 GYPRGPVTQGHSSRS*DQLDRECCT*ASEMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAA 158
G+P+ QG SS S + EC + + G +S G + G G + Y + GSR ++
Sbjct: 201 GFPQPGSEQGQSSSSSTKGSGECYSSGNGKHGSSSGGSAVSGSGHSNTYGKQGTGSRHSS 260
Query: 157 WLRRN 143
RR+
Sbjct: 261 SNRRS 265
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,871,501
Number of Sequences: 1657284
Number of extensions: 11414362
Number of successful extensions: 26116
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26098
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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