Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120865.seq
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   119   7e-29
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    27   0.48 
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   7.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   7.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.8  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  119 bits (287), Expect = 7e-29
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = -2

Query: 492 TYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSH 313
           TYGKPKSHGVNQLKP R LQS+AEE           L+SYWVAQD+++KYFEVI+VDP +
Sbjct: 80  TYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVIMVDPPN 139

Query: 312 KAIRRDPKINWIVNAVHKH 256
            AIRRDP +NWI NAVHKH
Sbjct: 140 NAIRRDPNVNWICNAVHKH 158



 Score = 72.9 bits (171), Expect = 7e-15
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = -1

Query: 253 EMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 119
           E+RGLTSAG+SSRGLGK +RYSQT GGSRRAA +RRN L LRR R
Sbjct: 160 ELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 185 LRVSMSLAETSGAATSRSQTTHLRCLCTAFT 277
           L + +SLA  +GA  S    T  RC+C A T
Sbjct: 8   LLLLLSLATVNGAFLSNLNATCFRCICDAST 38


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 561 VYVVLRIRVPTWXPASVHCLRVPTY 487
           +Y  L+ + P W    +HC + PT+
Sbjct: 587 IYTFLKRKEPDWRDRLLHCFK-PTH 610


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 561 VYVVLRIRVPTWXPASVHCLRVPTY 487
           +Y  L+ + P W    +HC + PT+
Sbjct: 587 IYTFLKRKEPDWRDRLLHCFK-PTH 610


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 217 RGLGKGHRYSQTKGGSRR 164
           +G+G GH Y   + G RR
Sbjct: 320 KGVGSGHLYYYEENGDRR 337


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,518
Number of Sequences: 2352
Number of extensions: 11268
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)