Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120863.seq
         (318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         23   3.6  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    22   4.8  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    22   4.8  

>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 279 GSVCVCVCPTVAL 241
           G++CVCVC  V++
Sbjct: 56  GTLCVCVCVDVSV 68


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 98  NNNTNNSYE*RFTYRMLHFITKTIRPVRTKRSH 196
           NNN NN +   +  R+   + +  R    +R H
Sbjct: 147 NNNNNNEHHNTYNARLSKLMQEKTRNAPPERGH 179


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 98  NNNTNNSYE*RFTYRMLHFITKTIRPVRTKRSH 196
           NNN NN +   +  R+   + +  R    +R H
Sbjct: 147 NNNNNNEHHNTYNARLSKLMQEKTRNAPPERGH 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,385
Number of Sequences: 2352
Number of extensions: 5001
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)