Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120863.seq
(318 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 30 1.7
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 29 3.0
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 28 5.2
M86752-1|AAA58682.1| 543|Homo sapiens transformation-sensitive ... 28 6.9
CR536512-1|CAG38750.1| 543|Homo sapiens STIP1 protein. 28 6.9
BT020011-1|AAV38814.1| 543|Homo sapiens stress-induced-phosphop... 28 6.9
BT020010-1|AAV38813.1| 543|Homo sapiens stress-induced-phosphop... 28 6.9
BC039299-1|AAH39299.1| 590|Homo sapiens STIP1 protein protein. 28 6.9
BC002987-1|AAH02987.1| 543|Homo sapiens stress-induced-phosphop... 28 6.9
AY437503-1|AAR92146.1| 108|Homo sapiens tumor differentiation f... 28 6.9
AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens ... 28 6.9
AK126216-1|BAC86490.1| 135|Homo sapiens protein ( Homo sapiens ... 28 6.9
AK026249-1|BAB15412.1| 160|Homo sapiens protein ( Homo sapiens ... 28 6.9
AK130282-1|BAC85320.1| 164|Homo sapiens protein ( Homo sapiens ... 27 9.1
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 285 VCGSVCVCVCPTVALFI*KSLVRIASLIVVC 193
+C SVCVC+C V++F+ V I + VC
Sbjct: 33 ICVSVCVCICVCVSVFV---CVCICVCVCVC 60
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 285 VCGSVCVCVCPTVALFI*KSLVRIASLIVVC 193
+C SVCVC+C +V + I V ++ + VC
Sbjct: 25 ICVSVCVCICVSVCVCI---CVCVSVFVCVC 52
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 297 VFARVCGSVCVCVC 256
VF VC SVCVCVC
Sbjct: 171 VFVSVCVSVCVCVC 184
Score = 25.4 bits (53), Expect(2) = 4.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 276 SVCVCVCPTVALFI*KSLVRIASLIVVC 193
SVC+CVC +V L + LV + + +C
Sbjct: 49 SVCLCVCVSVCLCV--CLVSVCLCVCLC 74
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 282 CGSVCVCVC 256
C VCVCVC
Sbjct: 11 CVCVCVCVC 19
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +2
Query: 146 LHFITKTIRPVRTKRSHTTIRLAIRTSDF---QINRATVGHTHTHTLPHT 286
+H T + T +HT + F I+R T H HTHTL HT
Sbjct: 5 MHIYTHAYTHMHTD-THTCTHIHSHIHTFTCTHIHRRTYTHRHTHTLMHT 53
>M86752-1|AAA58682.1| 543|Homo sapiens transformation-sensitive
protein protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 159 LKQFVPSEPKGRTRLSDSRYEQVIFK*TGLPSD 257
L Q + S+P+ RT LSD Y ++I + PSD
Sbjct: 133 LYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 165
>CR536512-1|CAG38750.1| 543|Homo sapiens STIP1 protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 159 LKQFVPSEPKGRTRLSDSRYEQVIFK*TGLPSD 257
L Q + S+P+ RT LSD Y ++I + PSD
Sbjct: 133 LYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 165
>BT020011-1|AAV38814.1| 543|Homo sapiens
stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 159 LKQFVPSEPKGRTRLSDSRYEQVIFK*TGLPSD 257
L Q + S+P+ RT LSD Y ++I + PSD
Sbjct: 133 LYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 165
>BT020010-1|AAV38813.1| 543|Homo sapiens
stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 159 LKQFVPSEPKGRTRLSDSRYEQVIFK*TGLPSD 257
L Q + S+P+ RT LSD Y ++I + PSD
Sbjct: 133 LYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 165
>BC039299-1|AAH39299.1| 590|Homo sapiens STIP1 protein protein.
Length = 590
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 159 LKQFVPSEPKGRTRLSDSRYEQVIFK*TGLPSD 257
L Q + S+P+ RT LSD Y ++I + PSD
Sbjct: 180 LYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 212
>BC002987-1|AAH02987.1| 543|Homo sapiens
stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 159 LKQFVPSEPKGRTRLSDSRYEQVIFK*TGLPSD 257
L Q + S+P+ RT LSD Y ++I + PSD
Sbjct: 133 LYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 165
>AY437503-1|AAR92146.1| 108|Homo sapiens tumor differentiation
factor protein.
Length = 108
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 257 HTHTHTLPHTRANT 298
HTHTHT HT NT
Sbjct: 28 HTHTHTHTHTHTNT 41
>AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ46204 fis, clone TESTI4009501. ).
Length = 225
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 179 RTKRSHTTIRLAIRTSDFQINRATVGHTHTHTLPHTRANTXXG 307
R R HTTI L+ S + H H HT HT +T G
Sbjct: 48 RACRDHTTI-LSGNRSFSAVAATPAKHKHMHTRTHTHMHTHTG 89
>AK126216-1|BAC86490.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ44228 fis, clone THYMU3006371. ).
Length = 135
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 239 NRATVGHTHTHTLPHT 286
NR T HTHTHT HT
Sbjct: 68 NRHTHAHTHTHTHTHT 83
>AK026249-1|BAB15412.1| 160|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22596 fis, clone HSI03808. ).
Length = 160
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 285 VCGSVCVCVCPTVALFI 235
VC VCVCVC V +F+
Sbjct: 35 VCVCVCVCVCVCVCVFV 51
>AK130282-1|BAC85320.1| 164|Homo sapiens protein ( Homo sapiens
cDNA FLJ26772 fis, clone PRS03245. ).
Length = 164
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 245 ATVGHTHTHTLPHTRAN 295
AT HTHTHT HT+ N
Sbjct: 101 ATHTHTHTHTHTHTQIN 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,736,273
Number of Sequences: 237096
Number of extensions: 573755
Number of successful extensions: 1090
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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