Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120863.seq
         (318 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069755-1|AAL39900.1|  401|Drosophila melanogaster LP11503p pro...    30   0.74 
AE014298-2080|AAN09346.1|  401|Drosophila melanogaster CG32593-P...    30   0.74 
AE014134-2458|AAN10869.1|  198|Drosophila melanogaster CG31771-P...    29   0.98 
AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA ...    27   5.2  
X05136-1|CAA28782.1|  590|Drosophila melanogaster protein ( Dros...    27   6.9  
BT023901-1|ABA81835.1|  430|Drosophila melanogaster IP14630p pro...    27   6.9  
AE014297-3343|AAS65196.1|  709|Drosophila melanogaster CG33337-P...    27   6.9  
AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA ...    27   6.9  
AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain ...    27   6.9  
BT023793-1|AAZ41802.1|  633|Drosophila melanogaster GH11127p pro...    26   9.1  
BT003299-1|AAO25059.1|  633|Drosophila melanogaster GH20047p pro...    26   9.1  
AY094735-1|AAM11088.1| 1171|Drosophila melanogaster GH27027p pro...    26   9.1  
AF321979-1|AAK15280.1|  967|Drosophila melanogaster fusilli prot...    26   9.1  
AE014296-2131|AAS65014.1| 1171|Drosophila melanogaster CG4357-PB...    26   9.1  
AE014296-2130|AAF49927.1| 1171|Drosophila melanogaster CG4357-PA...    26   9.1  
AE013599-2092|AAM70984.1|  633|Drosophila melanogaster CG8205-PB...    26   9.1  
AE013599-2091|AAM70983.1|  967|Drosophila melanogaster CG8205-PF...    26   9.1  
AE013599-2090|AAM70982.1|  967|Drosophila melanogaster CG8205-PE...    26   9.1  
AE013599-2089|AAM70981.1|  967|Drosophila melanogaster CG8205-PD...    26   9.1  

>AY069755-1|AAL39900.1|  401|Drosophila melanogaster LP11503p
           protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 0.74
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 239 NRATVGHTHTHTLPHTRANT 298
           N  T  HTHT TL HT  NT
Sbjct: 15  NETTHTHTHTQTLTHTHTNT 34


>AE014298-2080|AAN09346.1|  401|Drosophila melanogaster CG32593-PC,
           isoform C protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 0.74
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 239 NRATVGHTHTHTLPHTRANT 298
           N  T  HTHT TL HT  NT
Sbjct: 15  NETTHTHTHTQTLTHTHTNT 34


>AE014134-2458|AAN10869.1|  198|Drosophila melanogaster CG31771-PA
           protein.
          Length = 198

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 152 FITKTIRPVRTKRSHTTIRLAIRTSDFQINRATVGHTHTHT 274
           F       +RTK+   T + + +      NR T+ HTHTHT
Sbjct: 91  FTNTRTHDLRTKKKEETDKESEKDVHATDNRHTLNHTHTHT 131


>AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA
           protein.
          Length = 730

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 179 RTKRSHTTIRLAIRTSDFQI 238
           RTKRSH   RL+ +  DFQI
Sbjct: 218 RTKRSHRGKRLSTQAEDFQI 237


>X05136-1|CAA28782.1|  590|Drosophila melanogaster protein (
           Drosophila mRNA forDeformed (Dfd) protein. ).
          Length = 590

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 257 HTHTHTLPHTRANT 298
           H+HTH+LPH  +N+
Sbjct: 101 HSHTHSLPHHHSNS 114


>BT023901-1|ABA81835.1|  430|Drosophila melanogaster IP14630p
           protein.
          Length = 430

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 257 HTHTHTLPHTRANT 298
           H+HTH+LPH  +N+
Sbjct: 101 HSHTHSLPHHHSNS 114


>AE014297-3343|AAS65196.1|  709|Drosophila melanogaster CG33337-PA
           protein.
          Length = 709

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 212 AIRTSDFQINRATVGHTHTHTLP 280
           +I++ DF + + T  +THTH  P
Sbjct: 469 SIKSLDFSLQKKTYFYTHTHAAP 491


>AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA
           protein.
          Length = 586

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 257 HTHTHTLPHTRANT 298
           H+HTH+LPH  +N+
Sbjct: 101 HSHTHSLPHHHSNS 114


>AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain
           protein protein.
          Length = 586

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 257 HTHTHTLPHTRANT 298
           H+HTH+LPH  +N+
Sbjct: 101 HSHTHSLPHHHSNS 114


>BT023793-1|AAZ41802.1|  633|Drosophila melanogaster GH11127p
           protein.
          Length = 633

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 352 QSPLGGTHTHTHPHSHAH 369


>BT003299-1|AAO25059.1|  633|Drosophila melanogaster GH20047p
           protein.
          Length = 633

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 352 QSPLGGTHTHTHPHSHAH 369


>AY094735-1|AAM11088.1| 1171|Drosophila melanogaster GH27027p
           protein.
          Length = 1171

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +2

Query: 110 NNSYE*RFTYRMLHFITKTIRPVRTKRSHTTIRLAIRTSDFQINRATVGHTHTHTL 277
           +N Y+ ++     HF  + +  +   R+  +I+ A R +  +++ AT+   +TH+L
Sbjct: 140 DNEYDTKYGKSFRHFTREALPRLDNYRNMMSIQAAYRPTLDELHNATLVGKNTHSL 195


>AF321979-1|AAK15280.1|  967|Drosophila melanogaster fusilli
           protein.
          Length = 967

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 686 QSPLGGTHTHTHPHSHAH 703


>AE014296-2131|AAS65014.1| 1171|Drosophila melanogaster CG4357-PB,
           isoform B protein.
          Length = 1171

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +2

Query: 110 NNSYE*RFTYRMLHFITKTIRPVRTKRSHTTIRLAIRTSDFQINRATVGHTHTHTL 277
           +N Y+ ++     HF  + +  +   R+  +I+ A R +  +++ AT+   +TH+L
Sbjct: 140 DNEYDTKYGKSFRHFTREALPRLDNYRNMMSIQAAYRPTLDELHNATLVGKNTHSL 195


>AE014296-2130|AAF49927.1| 1171|Drosophila melanogaster CG4357-PA,
           isoform A protein.
          Length = 1171

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +2

Query: 110 NNSYE*RFTYRMLHFITKTIRPVRTKRSHTTIRLAIRTSDFQINRATVGHTHTHTL 277
           +N Y+ ++     HF  + +  +   R+  +I+ A R +  +++ AT+   +TH+L
Sbjct: 140 DNEYDTKYGKSFRHFTREALPRLDNYRNMMSIQAAYRPTLDELHNATLVGKNTHSL 195


>AE013599-2092|AAM70984.1|  633|Drosophila melanogaster CG8205-PB,
           isoform B protein.
          Length = 633

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 352 QSPLGGTHTHTHPHSHAH 369


>AE013599-2091|AAM70983.1|  967|Drosophila melanogaster CG8205-PF,
           isoform F protein.
          Length = 967

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 686 QSPLGGTHTHTHPHSHAH 703


>AE013599-2090|AAM70982.1|  967|Drosophila melanogaster CG8205-PE,
           isoform E protein.
          Length = 967

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 686 QSPLGGTHTHTHPHSHAH 703


>AE013599-2089|AAM70981.1|  967|Drosophila melanogaster CG8205-PD,
           isoform D protein.
          Length = 967

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 RATVGHTHTHTLPHTRAN 295
           ++ +G THTHT PH+ A+
Sbjct: 686 QSPLGGTHTHTHPHSHAH 703


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,361,006
Number of Sequences: 53049
Number of extensions: 191708
Number of successful extensions: 540
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)